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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1913910 |
| Transcript ID | Lj1g3v1913910.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: potassium channel AKT1-like [Glycine max] gi|356515474|ref|XP_003526425.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 86 | 86 | – | – | |
| PANTHER | 21 | 833 | 813 | 0 | – | |
| PANTHER | 21 | 833 | 813 | 0 | – | |
| SUPERFAMILY | 77 | 319 | 243 | 4.71E-43 | – | |
| Pfam | 83 | 325 | 243 | 5.80E-35 | ||
| Gene3D | 83 | 318 | 236 | 1.30E-39 | – | |
| TMHMM | 87 | 106 | 20 | – | – | |
| Phobius | 87 | 107 | 21 | – | – | |
| PRINTS | 95 | 102 | 8 | 1.00E-11 | ||
| Phobius | 108 | 118 | 11 | – | – | |
| TMHMM | 116 | 138 | 23 | – | – | |
| PRINTS | 118 | 128 | 11 | 1.00E-11 | ||
| Phobius | 119 | 138 | 20 | – | – | |
| PRINTS | 129 | 138 | 10 | 1.00E-11 | ||
| Phobius | 139 | 214 | 76 | – | – | |
| Phobius | 215 | 240 | 26 | – | – | |
| TMHMM | 220 | 242 | 23 | – | – | |
| Phobius | 241 | 296 | 56 | – | – | |
| PRINTS | 266 | 283 | 18 | 1.00E-11 | ||
| PRINTS | 292 | 303 | 12 | 1.00E-11 | ||
| Phobius | 297 | 319 | 23 | – | – | |
| TMHMM | 297 | 319 | 23 | – | – | |
| PRINTS | 310 | 319 | 10 | 1.00E-11 | ||
| Phobius | 320 | 895 | 576 | – | – | |
| SUPERFAMILY | 323 | 516 | 194 | 3.27E-36 | ||
| TMHMM | 387 | 409 | 23 | – | – | |
| Gene3D | 387 | 501 | 115 | 4.10E-21 | ||
| SMART | 398 | 515 | 118 | 5.00E-21 | ||
| ProSiteProfiles | 398 | 517 | 120 | 23.174 | ||
| CDD | 398 | 503 | 106 | 5.49E-23 | – | |
| Pfam | 418 | 502 | 85 | 8.00E-14 | ||
| SMART | 543 | 572 | 30 | 980 | ||
| SUPERFAMILY | 550 | 732 | 183 | 2.38E-39 | ||
| Pfam | 550 | 641 | 92 | 5.10E-12 | ||
| ProSiteProfiles | 550 | 732 | 183 | 37.454 | ||
| Gene3D | 550 | 733 | 184 | 6.50E-44 | ||
| CDD | 576 | 724 | 149 | 3.32E-27 | – | |
| ProSiteProfiles | 578 | 610 | 33 | 12.209 | ||
| SMART | 578 | 607 | 30 | 1.60E-04 | ||
| ProSiteProfiles | 611 | 643 | 33 | 10.312 | ||
| SMART | 611 | 640 | 30 | 7.9 | ||
| Pfam | 650 | 724 | 75 | 2.00E-10 | ||
| SMART | 675 | 704 | 30 | 3.60E-06 | ||
| ProSiteProfiles | 675 | 707 | 33 | 14.212 | ||
| Pfam | 830 | 891 | 62 | 2.90E-24 | ||
| ProSiteProfiles | 830 | 895 | 66 | 30.502 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ion channel activity | Enables the facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. May be either selective (it enables passage of a specific ion only) or non-selective (it enables passage of two or more ions of same charge but different size). | ||
| Molecular function | Voltage-gated potassium channel activity | Enables the transmembrane transfer of a potassium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Ion transport | The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Biological process | Potassium ion transport | The directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v1913910.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1913910.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.