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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2980370 |
| Transcript ID | Lj1g3v2980370.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 15 | 15 | – | – | |
| Phobius | 1 | 2 | 2 | – | – | |
| Phobius | 3 | 10 | 8 | – | – | |
| Phobius | 11 | 15 | 5 | – | – | |
| Phobius | 16 | 485 | 470 | – | – | |
| PANTHER | 26 | 483 | 458 | 2.00E-271 | – | |
| PANTHER | 26 | 483 | 458 | 2.00E-271 | – | |
| ProSiteProfiles | 70 | 104 | 35 | 9.087 | ||
| Pfam | 74 | 102 | 29 | 0.13 | ||
| ProSiteProfiles | 138 | 172 | 35 | 6.884 | ||
| Gene3D | 157 | 325 | 169 | 1.90E-08 | ||
| Pfam | 160 | 202 | 43 | 1.30E-04 | ||
| ProSiteProfiles | 173 | 203 | 31 | 9.536 | ||
| TIGRFAM | 175 | 206 | 32 | 1.80E-04 | ||
| SUPERFAMILY | 203 | 241 | 39 | 1.58E-06 | ||
| ProSiteProfiles | 204 | 238 | 35 | 13.45 | ||
| Pfam | 204 | 251 | 48 | 8.40E-12 | ||
| TIGRFAM | 206 | 239 | 34 | 2.50E-08 | ||
| ProSiteProfiles | 239 | 273 | 35 | 7.081 | ||
| ProSiteProfiles | 274 | 304 | 31 | 8.528 | ||
| TIGRFAM | 277 | 304 | 28 | 2.30E-06 | ||
| Pfam | 278 | 304 | 27 | 1.00E-04 | ||
| ProSiteProfiles | 305 | 339 | 35 | 11.663 | ||
| Pfam | 305 | 347 | 43 | 1.00E-07 | ||
| TIGRFAM | 307 | 341 | 35 | 1.30E-05 | ||
| ProSiteProfiles | 340 | 370 | 31 | 7.728 | ||
| ProSiteProfiles | 376 | 410 | 35 | 6.599 | ||
| Gene3D | 377 | 470 | 94 | 1.90E-08 | ||
| Pfam | 379 | 403 | 25 | 0.23 | ||
| SUPERFAMILY | 387 | 475 | 89 | 1.58E-06 | ||
| ProSiteProfiles | 441 | 476 | 36 | 5.952 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v2980370.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2980370.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.