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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3137930 |
| Transcript ID | Lj1g3v3137930.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: leucyl-tRNA synthetase, cytoplasmic-like [Glycine max] gi|356497127|ref|XP_003517414.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 18 | 18 | – | – | |
| PANTHER | 22 | 125 | 104 | 0 | – | |
| PANTHER | 22 | 125 | 104 | 0 | – | |
| SUPERFAMILY | 37 | 126 | 90 | 1.08E-93 | – | |
| Gene3D | 37 | 130 | 94 | 8.60E-99 | ||
| TIGRFAM | 39 | 1081 | 1043 | 1.00E-272 | ||
| Pfam | 44 | 126 | 83 | 1.30E-07 | ||
| ProSitePatterns | 76 | 87 | 12 | – | ||
| MobiDBLite | 135 | 174 | 40 | – | – | |
| Gene3D | 181 | 286 | 106 | 8.60E-99 | ||
| PANTHER | 191 | 339 | 149 | 0 | – | |
| PANTHER | 191 | 339 | 149 | 0 | – | |
| SUPERFAMILY | 201 | 282 | 82 | 1.08E-93 | – | |
| Pfam | 211 | 778 | 568 | 8.90E-31 | ||
| Gene3D | 290 | 554 | 265 | 2.40E-44 | ||
| SUPERFAMILY | 306 | 434 | 129 | 4.19E-28 | ||
| PANTHER | 367 | 469 | 103 | 0 | – | |
| PANTHER | 367 | 469 | 103 | 0 | – | |
| Coils | 474 | 494 | 21 | – | – | |
| SUPERFAMILY | 501 | 540 | 40 | 4.19E-28 | ||
| PANTHER | 511 | 1061 | 551 | 0 | – | |
| PANTHER | 511 | 1061 | 551 | 0 | – | |
| SUPERFAMILY | 540 | 785 | 246 | 1.08E-93 | – | |
| CDD | 553 | 781 | 229 | 1.75E-68 | – | |
| Gene3D | 555 | 769 | 215 | 8.60E-99 | ||
| Gene3D | 770 | 916 | 147 | 4.20E-18 | ||
| CDD | 779 | 899 | 121 | 9.74E-43 | – | |
| SUPERFAMILY | 812 | 948 | 137 | 3.71E-18 | ||
| Pfam | 818 | 939 | 122 | 4.00E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Aminoacyl-tRNA editing activity | The hydrolysis of an incorrectly aminoacylated tRNA. | ||
| Molecular function | Aminoacyl-tRNA ligase activity | Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP. | ||
| Molecular function | Leucine-tRNA ligase activity | Catalysis of the reaction: L-leucine + ATP + tRNA(Leu) = AMP + diphosphate + 2 H(+) + Leu-tRNA(Leu). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | TRNA aminoacylation for protein translation | The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA and the alpha carboxylic acid group of an amino acid, to be used in ribosome-mediated polypeptide synthesis. | ||
| Biological process | Leucyl-tRNA aminoacylation | The process of coupling leucine to leucyl-tRNA, catalyzed by leucyl-tRNA synthetase. The leucyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a leucine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification. |
Expression pattern of Lj1g3v3137930.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3137930.1, powered by CORGI.
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