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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3608410 |
| Transcript ID | Lj1g3v3608410.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: dynamin-related protein 1E-like isoform 1 [Glycine max] gi|356527252|ref|XP_003532226.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 615 | 612 | 0 | – | |
| Gene3D | 4 | 316 | 313 | 9.40E-132 | ||
| PANTHER | 4 | 615 | 612 | 0 | ||
| SMART | 5 | 258 | 254 | 4.30E-112 | ||
| SUPERFAMILY | 35 | 315 | 281 | 6.70E-74 | ||
| ProSiteProfiles | 38 | 307 | 270 | 56.676 | ||
| CDD | 41 | 307 | 267 | 1.95E-132 | – | |
| PRINTS | 41 | 59 | 19 | 4.80E-59 | ||
| Pfam | 44 | 219 | 176 | 1.80E-54 | ||
| PRINTS | 66 | 83 | 18 | 4.80E-59 | ||
| ProSitePatterns | 67 | 76 | 10 | – | ||
| PRINTS | 139 | 156 | 18 | 4.80E-59 | ||
| PRINTS | 189 | 207 | 19 | 4.80E-59 | ||
| PRINTS | 208 | 224 | 17 | 4.80E-59 | ||
| Pfam | 229 | 496 | 268 | 5.70E-62 | ||
| PRINTS | 231 | 250 | 20 | 4.80E-59 | ||
| SMART | 520 | 613 | 94 | 9.80E-33 | ||
| Pfam | 522 | 613 | 92 | 1.60E-24 | ||
| ProSiteProfiles | 525 | 617 | 93 | 22.927 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of Lj1g3v3608410.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3608410.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.