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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4433200 |
| Transcript ID | Lj1g3v4433200.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Cicer arietinum] gi|502109543|ref|XP_004493669.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 32 | 687 | 656 | 3.20E-162 | – | |
| PANTHER | 32 | 687 | 656 | 3.20E-162 | – | |
| SUPERFAMILY | 61 | 149 | 89 | 1.04E-05 | ||
| Gene3D | 62 | 405 | 344 | 9.30E-83 | ||
| SMART | 73 | 127 | 55 | 18 | ||
| CDD | 113 | 217 | 105 | 2.00E-10 | – | |
| SMART | 128 | 176 | 49 | 0.15 | ||
| SUPERFAMILY | 164 | 502 | 339 | 9.15E-55 | ||
| SMART | 178 | 218 | 41 | 4.20E-08 | ||
| Pfam | 182 | 217 | 36 | 1.10E-07 | ||
| CDD | 185 | 301 | 117 | 4.08E-24 | – | |
| ProSiteProfiles | 189 | 224 | 36 | 13.037 | ||
| Pfam | 220 | 259 | 40 | 2.00E-08 | ||
| SMART | 220 | 260 | 41 | 1.10E-06 | ||
| ProSiteProfiles | 231 | 273 | 43 | 11.882 | ||
| SMART | 262 | 302 | 41 | 2.5 | ||
| CDD | 267 | 381 | 115 | 2.72E-16 | – | |
| SMART | 305 | 345 | 41 | 0.0066 | ||
| ProSiteProfiles | 316 | 358 | 43 | 11.287 | ||
| SMART | 346 | 386 | 41 | 24 | ||
| ProSiteProfiles | 357 | 399 | 43 | 11.882 | ||
| Gene3D | 439 | 504 | 66 | 9.30E-83 | ||
| SMART | 461 | 501 | 41 | 0.38 | ||
| SUPERFAMILY | 525 | 627 | 103 | 3.53E-30 | ||
| Gene3D | 526 | 631 | 106 | 6.30E-32 | – | |
| Pfam | 526 | 629 | 104 | 6.90E-27 | ||
| ProSiteProfiles | 534 | 601 | 68 | 18.265 | ||
| SMART | 534 | 631 | 98 | 4.70E-24 | ||
| CDD | 631 | 670 | 40 | 1.26E-04 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v4433200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4433200.1, powered by CORGI.
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