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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4579080 |
| Transcript ID | Lj1g3v4579080.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: DNA helicase MCM8-like [Cicer arietinum] gi|502111051|ref|XP_004493943.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 73 | 276 | 204 | 4.11E-47 | ||
| PANTHER | 75 | 308 | 234 | 3.30E-124 | – | |
| PANTHER | 75 | 308 | 234 | 3.30E-124 | – | |
| SMART | 142 | 396 | 255 | 1.00E-08 | ||
| Gene3D | 145 | 172 | 28 | 3.20E-25 | – | |
| Pfam | 146 | 274 | 129 | 5.00E-29 | ||
| Gene3D | 174 | 214 | 41 | 9.50E-04 | ||
| Gene3D | 224 | 304 | 81 | 3.20E-25 | – | |
| PANTHER | 325 | 396 | 72 | 3.30E-124 | – | |
| PANTHER | 325 | 396 | 72 | 3.30E-124 | – | |
| Pfam | 350 | 391 | 42 | 1.50E-08 | ||
| ProSiteProfiles | 352 | 396 | 45 | 13.362 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | DNA replication initiation | The process in which DNA-dependent DNA replication is started; this begins with the ATP dependent loading of an initiator complex onto the DNA, this is followed by DNA melting and helicase activity. In bacteria, the gene products that enable the helicase activity are loaded after the initial melting and in archaea and eukaryotes, the gene products that enable the helicase activity are inactive when they are loaded and subsequently activate. |
Expression pattern of Lj1g3v4579080.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4579080.3, powered by CORGI.
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