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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR004039
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 14 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.148s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0162139.3
n.a. Zinc finger protein-related isoform 1 [Theobroma cacao] gi|508708206|gb|EOY00103.1| chr0 76414002 76424433 +
2 domain predictions
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Lj1g3v3354070.1
n.a. PREDICTED: RING finger and CHY zinc finger domain-containing protein 1-like [Glycine max] gi|356555553|ref|XP_003546095.1| chr1 38460510 38462631 -
2 domain predictions
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Lj1g3v3354070.2
n.a. PREDICTED: RING finger and CHY zinc finger domain-containing protein 1-like [Glycine max] gi|356555553|ref|XP_003546095.1| chr1 38460510 38463626 -
2 domain predictions
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Lj1g3v4289040.1
n.a. PREDICTED: DNA replication licensing factor mcm4-B-like [Cicer arietinum] gi|502149334|ref|XP_004507486.1| chr1 50527008 50535109 -
2 domain predictions
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Lj1g3v4579080.3
n.a. PREDICTED: DNA helicase MCM8-like [Cicer arietinum] gi|502111051|ref|XP_004493943.1| chr1 54460299 54463532 -
2 domain predictions
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Lj1g3v4917520.1
n.a. PREDICTED: RING finger and CHY zinc finger domain-containing protein 1-like [Glycine max] gi|356505514|ref|XP_003521535.1| chr1 59630548 59634098 +
2 domain predictions
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Lj1g3v4957690.1
n.a. PREDICTED: rubredoxin-like [Cicer arietinum] gi|502113516|ref|XP_004494675.1| chr1 60453452 60454994 -
2 domain predictions
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Lj2g3v0719120.1
n.a. Zinc finger protein-like protein [Medicago truncatula] gi|357500299|ref|XP_003620438.1| chr2 11385534 11396139 +
2 domain predictions
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Lj2g3v2124630.1
n.a. Rubredoxin family protein [Theobroma cacao] gi|508718096|gb|EOY09993.1| chr2 31955461 31958304 +
2 domain predictions
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Lj3g3v3033270.1
n.a. PREDICTED: RING finger and CHY zinc finger domain-containing protein 1-like [Glycine max] gi|356539356|ref|XP_003538164.1| chr3 37989462 37992179 +
2 domain predictions
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Lj4g3v2871730.2
n.a. Rubredoxin-like superfamily protein [Theobroma cacao] gi|508775414|gb|EOY22670.1| chr4 38379118 38380958 -
2 domain predictions
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Lj4g3v3099530.1
n.a. Zinc finger protein-like protein [Medicago truncatula] gi|357500299|ref|XP_003620438.1| chr4 41297066 41311617 -
2 domain predictions
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Lj4g3v3099540.1
n.a. Zinc finger protein-like protein [Medicago truncatula] gi|357500299|ref|XP_003620438.1| chr4 41297133 41311409 -
2 domain predictions
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Lj6g3v1918320.1
n.a. RING finger and CHY zinc finger domain-containing protein [Medicago truncatula] gi|357447417|ref|XP_003593984.1| chr6 21780326 21783921 -
2 domain predictions
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