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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4701870 |
| Transcript ID | Lj1g3v4701870.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter G family member 39-like [Cicer arietinum] gi|502111745|ref|XP_004494154.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 341 | 341 | – | – | |
| SMART | 1 | 223 | 223 | 3.10E-04 | ||
| Gene3D | 2 | 71 | 70 | 1.90E-32 | ||
| Pfam | 2 | 171 | 170 | 7.90E-14 | ||
| SUPERFAMILY | 2 | 246 | 245 | 1.18E-29 | ||
| PANTHER | 32 | 576 | 545 | 0 | – | |
| PANTHER | 32 | 576 | 545 | 0 | – | |
| Gene3D | 106 | 235 | 130 | 1.90E-32 | ||
| Pfam | 325 | 537 | 213 | 3.80E-36 | ||
| TMHMM | 341 | 363 | 23 | – | – | |
| Phobius | 342 | 363 | 22 | – | – | |
| Phobius | 364 | 377 | 14 | – | – | |
| Phobius | 378 | 401 | 24 | – | – | |
| TMHMM | 384 | 406 | 23 | – | – | |
| Phobius | 402 | 412 | 11 | – | – | |
| Phobius | 413 | 432 | 20 | – | – | |
| TMHMM | 426 | 448 | 23 | – | – | |
| Phobius | 433 | 437 | 5 | – | – | |
| Phobius | 438 | 454 | 17 | – | – | |
| Phobius | 455 | 460 | 6 | – | – | |
| Phobius | 461 | 479 | 19 | – | – | |
| TMHMM | 461 | 480 | 20 | – | – | |
| Phobius | 480 | 484 | 5 | – | – | |
| TMHMM | 485 | 507 | 23 | – | – | |
| Phobius | 485 | 508 | 24 | – | – | |
| Phobius | 509 | 514 | 6 | – | – | |
| TMHMM | 514 | 533 | 20 | – | – | |
| Phobius | 515 | 533 | 19 | – | – | |
| Phobius | 534 | 570 | 37 | – | – | |
| Pfam | 542 | 599 | 58 | 1.90E-22 | ||
| Phobius | 571 | 593 | 23 | – | – | |
| TMHMM | 571 | 593 | 23 | – | – | |
| Phobius | 594 | 610 | 17 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of Lj1g3v4701870.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4701870.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.