Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj1g3v4838350.2

Overview

Field Value
Gene ID Lj1g3v4838350
Transcript ID Lj1g3v4838350.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: chaperone protein ClpB4, mitochondrial-like [Glycine max] gi|356507345|ref|XP_003522428.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11638:SF86
54 444 391 3.90E-234 –
PANTHER
PTHR11638
54 444 391 3.90E-234 –
SUPERFAMILY
SSF52540
64 394 331 3.03E-80
IPR027417
Gene3D
G3DSA:3.40.50.300
65 245 181 8.70E-44
IPR027417
CDD
cd00009
85 242 158 1.94E-23 –
SMART
SM00382
102 246 145 1.40E-09
IPR003593
Pfam
PF00004
107 241 135 4.10E-13
IPR003959
ProSitePatterns
PS00870
198 210 13 –
IPR018368
Gene3D
G3DSA:1.10.8.60
247 330 84 7.30E-34 –
Coils
Coil
316 336 21 – –
Coils
Coil
339 366 28 – –
Coils
Coil
414 434 21 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of

Genome browser

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj1g3v4838350.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4838350.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.