Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

IPR018368

Source: InterPro

Description

IPR018368 is a ClpA/B, conserved site 1.

<p>The ClpA/B family of ATP-binding proteins includes the regulatory subunit of the ATP-dependent protease Clp, ClpA; heat shock proteins ClpB, 104 and 78; and chloroplast proteins CD4a (ClpC) and CD4b [[cite:PUB00004102], [cite:PUB00004707]]. The proteins are thought to protect cells from stress by controlling the aggregation and denaturation of vital cellular structures. They vary in size, but share two conserved regions of about 200 amino acids that each contains an ATP-binding site [[cite:PUB00004707]].</p> <p>This entry represents a conserved site found in the first conserved region.</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of

Associated Lotus transcripts 47

Transcript Name Description Predicted domains Domain count
Lj1g3v1386490.1
– PREDICTED: chaperone protein ClpD, chloroplastic-like [Glycine max] gi|356507402|ref|XP_003522456.1|
Domains
26
Lj1g3v1453970.1
– PREDICTED: chaperone protein ClpC, chloroplastic-like [Glycine max] gi|356516495|ref|XP_003526929.1|
Domains
21
Lj1g3v1818790.1
–
Domains
22
Lj1g3v1818790.2
– PREDICTED: chaperone protein ClpB4, mitochondrial-like [Cicer arietinum] gi|502132470|ref|XP_004501376.1|
Domains
30
Lj1g3v2996640.1
– PREDICTED: chaperone protein ClpB3, chloroplastic-like isoform X1 [Cicer arietinum] gi|502101806|ref|XP_004491878.1|
Domains
28
Lj1g3v2996640.2
– PREDICTED: chaperone protein ClpB3, chloroplastic-like isoform X2 [Cicer arietinum] gi|502101810|ref|XP_004491879.1|
Domains
28
Lj1g3v4690470.1
– PREDICTED: chaperone protein ClpC, chloroplastic-like [Glycine max] gi|356513459|ref|XP_003525431.1|
Domains
25
Lj1g3v4838350.1
– PREDICTED: chaperone protein ClpB4, mitochondrial-like [Glycine max] gi|356507345|ref|XP_003522428.1|
Domains
12
Lj1g3v4838350.2
– PREDICTED: chaperone protein ClpB4, mitochondrial-like [Glycine max] gi|356507345|ref|XP_003522428.1|
Domains
14
Lj2g3v1069410.1
– Chaperone protein clpB [Medicago truncatula] gi|357496641|ref|XP_003618609.1|
Domains
28
Lj2g3v1069410.2
– Chaperone protein clpB [Medicago truncatula] gi|357496641|ref|XP_003618609.1|
Domains
28
Lj4g3v1687570.1
– Heat shock protein [Glycine max] gi|351725607|ref|NP_001238122.1|
Domains
26
Lj4g3v2882010.1
– PREDICTED: chaperone protein ClpC, chloroplastic-like isoform 1 [Glycine max] gi|356508861|ref|XP_003523172.1|
Domains
24
Lj4g3v2882010.2
– PREDICTED: chaperone protein ClpC, chloroplastic-like isoform 1 [Glycine max] gi|356508861|ref|XP_003523172.1|
Domains
33
LotjaGi1g1v0330800.1
– ATP-dependent Clp protease ATP-binding subunit; TAIR: AT5G51070.1 Clp ATPase; Swiss-Prot: sp|P42762|CLPD_ARATH Chaperone protein ClpD, chloroplastic; TrEMBL-Plants: tr|I1JXT1|I1JXT1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0330800
Domains
30
LotjaGi1g1v0333900.1
– ATP-dependent Clp protease ATP-binding subunit; TAIR: AT5G50920.1 CLPC homologue 1; Swiss-Prot: sp|P35100|CLPC_PEA Chaperone protein ClpC, chloroplastic; TrEMBL-Plants: tr|I1JXP9|I1JXP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0333900
Domains
27
LotjaGi1g1v0333900.2
– ATP-dependent Clp protease ATP-binding subunit; TAIR: AT5G50920.1 CLPC homologue 1; Swiss-Prot: sp|P35100|CLPC_PEA Chaperone protein ClpC, chloroplastic; TrEMBL-Plants: tr|A0A0L9UEV5|A0A0L9UEV5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0333900
Domains
32
LotjaGi1g1v0333900.3
– ATP-dependent Clp protease ATP-binding subunit; TAIR: AT5G50920.1 CLPC homologue 1; Swiss-Prot: sp|P35100|CLPC_PEA Chaperone protein ClpC, chloroplastic; TrEMBL-Plants: tr|I1JXP9|I1JXP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0333900
Domains
32
LotjaGi1g1v0378600.1
– ATP-dependent chaperone ClpB; TAIR: AT2G25140.1 casein lytic proteinase B4; Swiss-Prot: sp|Q8VYJ7|CLPB4_ARATH Chaperone protein ClpB4, mitochondrial; TrEMBL-Plants: tr|I1JU82|I1JU82_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0378600
Domains
34
LotjaGi1g1v0509100.1
– ATP-dependent chaperone ClpB; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|A0A151TCE6|A0A151TCE6_CAJCA Chaperone protein clpB 2; Found in the gene: LotjaGi1g1v0509100
Domains
32
LotjaGi1g1v0509100.2
– ATP-dependent chaperone ClpB; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|A0A151TCE6|A0A151TCE6_CAJCA Chaperone protein clpB 2; Found in the gene: LotjaGi1g1v0509100
Domains
24
LotjaGi1g1v0509100.3
– Chaperone clpb, putative; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|A0A1J7HJB5|A0A1J7HJB5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0509100
Domains
32
LotjaGi1g1v0509100.4
– ATP-dependent chaperone ClpB; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|A0A072U702|A0A072U702_MEDTR Casein lytic proteinase B3; Found in the gene: LotjaGi1g1v0509100
Domains
32
LotjaGi1g1v0509100.5
– ATP-dependent chaperone ClpB; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|A0A072U702|A0A072U702_MEDTR Casein lytic proteinase B3; Found in the gene: LotjaGi1g1v0509100
Domains
32
LotjaGi1g1v0684200.1
– ATP-dependent Clp protease ATP-binding subunit; TAIR: AT5G50920.1 CLPC homologue 1; Swiss-Prot: sp|P35100|CLPC_PEA Chaperone protein ClpC, chloroplastic; TrEMBL-Plants: tr|I1JXP9|I1JXP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0684200
Domains
32
LotjaGi1g1v0684200.2
– ATP-dependent Clp protease ATP-binding subunit ClpB; TAIR: AT5G50920.1 CLPC homologue 1; Swiss-Prot: sp|P35100|CLPC_PEA Chaperone protein ClpC, chloroplastic; TrEMBL-Plants: tr|A0A1J7GIN0|A0A1J7GIN0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0684200
Domains
32
LotjaGi1g1v0684200.3
– ATP-dependent Clp protease ATP-binding subunit; TAIR: AT5G50920.1 CLPC homologue 1; Swiss-Prot: sp|P35100|CLPC_PEA Chaperone protein ClpC, chloroplastic; TrEMBL-Plants: tr|I1JXP9|I1JXP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0684200
Domains
32
LotjaGi1g1v0684200.4
– ATP-dependent Clp protease ATP-binding subunit; TAIR: AT5G50920.1 CLPC homologue 1; Swiss-Prot: sp|P35100|CLPC_PEA Chaperone protein ClpC, chloroplastic; TrEMBL-Plants: tr|I1JXP9|I1JXP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0684200
Domains
32
LotjaGi1g1v0684200.5
– ATP-dependent Clp protease ATP-binding subunit; TAIR: AT5G50920.1 CLPC homologue 1; Swiss-Prot: sp|P35100|CLPC_PEA Chaperone protein ClpC, chloroplastic; TrEMBL-Plants: tr|I1JXP9|I1JXP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0684200
Domains
32
LotjaGi1g1v0757900_LC.2
– Chaperone ClpB, putative; TAIR: AT2G25140.1 casein lytic proteinase B4; Swiss-Prot: sp|Q8VYJ7|CLPB4_ARATH Chaperone protein ClpB4, mitochondrial; TrEMBL-Plants: tr|A0A0B2RCK6|A0A0B2RCK6_GLYSO Chaperone protein ClpB4, mitochondrial; Found in the gene: LotjaGi1g1v0757900_LC
Domains
15
LotjaGi1g1v0757900_LC.3
– Chaperone ClpB, putative; TAIR: AT2G25140.1 casein lytic proteinase B4; Swiss-Prot: sp|Q8VYJ7|CLPB4_ARATH Chaperone protein ClpB4, mitochondrial; TrEMBL-Plants: tr|A0A0B2PHE9|A0A0B2PHE9_GLYSO Chaperone protein ClpB4, mitochondrial; Found in the gene: LotjaGi1g1v0757900_LC
Domains
13
LotjaGi1g1v0758500_LC.2
– Chaperone ClpB, putative; TAIR: AT2G25140.1 casein lytic proteinase B4; Swiss-Prot: sp|Q8VYJ7|CLPB4_ARATH Chaperone protein ClpB4, mitochondrial; TrEMBL-Plants: tr|I1JU82|I1JU82_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0758500_LC
Domains
15
LotjaGi1g1v0758500_LC.3
– Chaperone ClpB, putative; TAIR: AT2G25140.1 casein lytic proteinase B4; Swiss-Prot: sp|Q8VYJ7|CLPB4_ARATH Chaperone protein ClpB4, mitochondrial; TrEMBL-Plants: tr|A0A0B2PHE9|A0A0B2PHE9_GLYSO Chaperone protein ClpB4, mitochondrial; Found in the gene: LotjaGi1g1v0758500_LC
Domains
13
LotjaGi2g1v0264100.1
– ATP-dependent chaperone ClpB; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|G7KLS1|G7KLS1_MEDTR Chaperone protein ClpB3; Found in the gene: LotjaGi2g1v0264100
Domains
32
LotjaGi2g1v0264100.2
– ATP-dependent chaperone ClpB; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|G7KLS1|G7KLS1_MEDTR Chaperone protein ClpB3; Found in the gene: LotjaGi2g1v0264100
Domains
32
LotjaGi2g1v0264100.3
– ATP-dependent chaperone ClpB; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|G7KLS1|G7KLS1_MEDTR Chaperone protein ClpB3; Found in the gene: LotjaGi2g1v0264100
Domains
32
LotjaGi2g1v0264100.4
– ATP-dependent chaperone ClpB; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|G7KLS1|G7KLS1_MEDTR Chaperone protein ClpB3; Found in the gene: LotjaGi2g1v0264100
Domains
24
LotjaGi2g1v0264100.5
– ATP-dependent chaperone ClpB; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|G7KLS1|G7KLS1_MEDTR Chaperone protein ClpB3; Found in the gene: LotjaGi2g1v0264100
Domains
31
LotjaGi2g1v0264100.6
– ATP-dependent chaperone ClpB; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|G7KLS1|G7KLS1_MEDTR Chaperone protein ClpB3; Found in the gene: LotjaGi2g1v0264100
Domains
32
LotjaGi2g1v0264100.7
– ATP-dependent chaperone ClpB; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|G7KLS1|G7KLS1_MEDTR Chaperone protein ClpB3; Found in the gene: LotjaGi2g1v0264100
Domains
32
LotjaGi4g1v0253800.1
– Chaperone clpb, putative; TAIR: AT1G74310.1 heat shock protein 101; Swiss-Prot: sp|P42730|CLPB1_ARATH Chaperone protein ClpB1; TrEMBL-Plants: tr|A0A1J7I0F2|A0A1J7I0F2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0253800
Domains
30
LotjaGi4g1v0253800.2
– ATP-dependent chaperone ClpB; TAIR: AT1G74310.1 heat shock protein 101; Swiss-Prot: sp|P42730|CLPB1_ARATH Chaperone protein ClpB1; TrEMBL-Plants: tr|A0A1J7I0F2|A0A1J7I0F2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0253800
Domains
22
LotjaGi4g1v0253800.3
– Chaperone clpb, putative; TAIR: AT1G74310.1 heat shock protein 101; Swiss-Prot: sp|P42730|CLPB1_ARATH Chaperone protein ClpB1; TrEMBL-Plants: tr|A0A1J7I0F2|A0A1J7I0F2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0253800
Domains
30
LotjaGi4g1v0421200.1
– ATP-dependent Clp protease ATP-binding subunit; TAIR: AT5G50920.1 CLPC homologue 1; Swiss-Prot: sp|P35100|CLPC_PEA Chaperone protein ClpC, chloroplastic; TrEMBL-Plants: tr|I1JXP9|I1JXP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0421200
Domains
37
LotjaGi4g1v0421200.2
– ATP-dependent Clp protease ATP-binding subunit; TAIR: AT5G50920.1 CLPC homologue 1; Swiss-Prot: sp|P35100|CLPC_PEA Chaperone protein ClpC, chloroplastic; TrEMBL-Plants: tr|I1JXP9|I1JXP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0421200
Domains
37
LotjaGi4g1v0421200.3
– ATP-dependent Clp protease ATP-binding subunit; TAIR: AT5G50920.1 CLPC homologue 1; Swiss-Prot: sp|P35100|CLPC_PEA Chaperone protein ClpC, chloroplastic; TrEMBL-Plants: tr|I1JXP9|I1JXP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0421200
Domains
37
LotjaGi4g1v0421200.4
– ATP-dependent Clp protease ATP-binding subunit ClpB; TAIR: AT5G50920.1 CLPC homologue 1; Swiss-Prot: sp|P35100|CLPC_PEA Chaperone protein ClpC, chloroplastic; TrEMBL-Plants: tr|A0A1J7GIN0|A0A1J7GIN0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0421200
Domains
37

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd00009 CDD 1 2.13