Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj1g3v5038190.1

Overview

Field Value
Gene ID Lj1g3v5038190
Transcript ID Lj1g3v5038190.1
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: bifunctional fucokinase/fucose pyrophosphorylase-like [Cicer arietinum] gi|502114036|ref|XP_004494840.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Pfam
PF07959
1 342 342 9.70E-94
IPR012887
PANTHER
PTHR32463
1 864 864 0 –
Gene3D
G3DSA:3.30.230.10
520 694 175 1.60E-12
IPR014721
SUPERFAMILY
SSF54211
520 703 184 6.68E-23
IPR020568
Pfam
PF00288
627 689 63 9.10E-09
IPR006204
PRINTS
PR00959
632 654 23 2.10E-08
IPR006206
SUPERFAMILY
SSF55060
722 850 129 1.82E-22
IPR013750
Gene3D
G3DSA:3.30.70.890
725 854 130 3.00E-19
IPR013750
Pfam
PF08544
777 849 73 2.60E-07
IPR013750
PRINTS
PR00959
818 835 18 2.10E-08
IPR006206
Coils
Coil
830 853 24 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0005737
Cellular component Cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Subterm of
GO:0016301
Molecular function Kinase activity Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
Subterm of
GO:0016772
Molecular function Transferase activity, transferring phosphorus-containing groups Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor).
Subterm of
GO:0016773
Molecular function Phosphotransferase activity, alcohol group as acceptor Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor).
Subterm of

Genome browser

LORE1 insertions 88

Expression data

Expression pattern

Expression pattern of Lj1g3v5038190.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v5038190.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.