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| Field | Value |
|---|---|
| Gene ID | Lj1g3v5061300 |
| Transcript ID | Lj1g3v5061300.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: 26S protease regulatory subunit 7-like [Glycine max] gi|356520182|ref|XP_003528743.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 9 | 377 | 369 | 4.90E-265 | – | |
| TIGRFAM | 50 | 360 | 311 | 1.80E-123 | ||
| Gene3D | 109 | 298 | 190 | 1.20E-58 | ||
| SUPERFAMILY | 114 | 367 | 254 | 1.51E-68 | ||
| CDD | 122 | 289 | 168 | 4.13E-27 | – | |
| SMART | 152 | 291 | 140 | 1.00E-19 | ||
| Pfam | 156 | 288 | 133 | 3.40E-39 | ||
| ProSitePatterns | 259 | 277 | 19 | – | ||
| Gene3D | 299 | 363 | 65 | 2.10E-24 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. | ||
| Biological process | Protein catabolic process | The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds. |
Expression pattern of Lj1g3v5061300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v5061300.1, powered by CORGI.
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