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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR005937
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We have found 34 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.521s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0122529.1
n.a. PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like [Glycine max] gi|356505102|ref|XP_003521331.1| chr0 54724839 54728135 +
2 domain predictions
3 GO terms
Lj1g3v4549030.1
n.a. PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like [Glycine max] gi|356505102|ref|XP_003521331.1| chr1 53644286 53648815 -
2 domain predictions
3 GO terms
Lj1g3v5061300.1
n.a. PREDICTED: 26S protease regulatory subunit 7-like [Glycine max] gi|356520182|ref|XP_003528743.1| chr1 62078338 62081529 -
2 domain predictions
3 GO terms
Lj3g3v2038730.1
n.a. PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Cicer arietinum] gi|502142068|ref|XP_004504777.1| chr3 26088328 26091504 -
2 domain predictions
3 GO terms
Lj3g3v2532340.1
n.a. PREDICTED: 26S protease regulatory subunit 7-like [Cicer arietinum] gi|502156672|ref|XP_004510590.1| chr3 31134359 31137223 -
2 domain predictions
3 GO terms
Lj3g3v2532340.2
n.a. PREDICTED: 26S protease regulatory subunit 7-like [Glycine max] gi|356520182|ref|XP_003528743.1| chr3 31134359 31138246 -
2 domain predictions
3 GO terms
LotjaGi1g1v0422700.1
n.a. 26S protease regulatory subunit; TAIR: AT1G45000.1 AAA-type ATPase family protein; Swiss-Prot: sp|Q9SEI3|PS10A_ARATH 26S protease regulatory subunit 10B homolog A; TrEMBL-Plants: tr|A0A072VDE6|A0A072VDE6_MEDTR 26S proteasome regulatory particle triple-A ATPase protein; Found in the gene: LotjaGi1g1v0422700 LjG1.1_chr1 91683625 91689197 -
2 domain predictions
3 GO terms
LotjaGi1g1v0422700.2
n.a. 26S protease regulatory subunit; TAIR: AT1G45000.1 AAA-type ATPase family protein; Swiss-Prot: sp|Q9SEI3|PS10A_ARATH 26S protease regulatory subunit 10B homolog A; TrEMBL-Plants: tr|A9PEV6|A9PEV6_POPTR Uncharacterized protein; Found in the gene: LotjaGi1g1v0422700 LjG1.1_chr1 91684228 91688370 -
2 domain predictions
3 GO terms
LotjaGi1g1v0422700.4
n.a. 26S protease regulatory subunit; TAIR: AT1G45000.1 AAA-type ATPase family protein; Swiss-Prot: sp|Q9SEI3|PS10A_ARATH 26S protease regulatory subunit 10B homolog A; TrEMBL-Plants: tr|A9PEV6|A9PEV6_POPTR Uncharacterized protein; Found in the gene: LotjaGi1g1v0422700 LjG1.1_chr1 91684228 91689103 -
2 domain predictions
3 GO terms
LotjaGi1g1v0422700.5
n.a. 26S protease regulatory subunit; TAIR: AT1G45000.1 AAA-type ATPase family protein; Swiss-Prot: sp|Q9SEI3|PS10A_ARATH 26S protease regulatory subunit 10B homolog A; TrEMBL-Plants: tr|A0A0L9V939|A0A0L9V939_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0422700 LjG1.1_chr1 91684228 91689103 -
2 domain predictions
3 GO terms
LotjaGi1g1v0700400.1
n.a. 26S protease regulatory subunit; TAIR: AT4G29040.1 regulatory particle AAA-ATPase 2A; Swiss-Prot: sp|Q9SZD4|PRS4A_ARATH 26S proteasome regulatory subunit 4 homolog A; TrEMBL-Plants: tr|A0A0R4J302|A0A0R4J302_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0700400 LjG1.1_chr1 126846479 126859387 +
2 domain predictions
3 GO terms
LotjaGi1g1v0700400.2
n.a. 26S protease regulatory subunit; TAIR: AT4G29040.1 regulatory particle AAA-ATPase 2A; Swiss-Prot: sp|Q9SZD4|PRS4A_ARATH 26S proteasome regulatory subunit 4 homolog A; TrEMBL-Plants: tr|A0A0R4J302|A0A0R4J302_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0700400 LjG1.1_chr1 126846488 126859108 +
2 domain predictions
3 GO terms
LotjaGi1g1v0700400.4
n.a. 26S protease regulatory subunit; TAIR: AT4G29040.1 regulatory particle AAA-ATPase 2A; Swiss-Prot: sp|Q9SZD4|PRS4A_ARATH 26S proteasome regulatory subunit 4 homolog A; TrEMBL-Plants: tr|A0A0R4J302|A0A0R4J302_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0700400 LjG1.1_chr1 126846565 126850734 +
2 domain predictions
3 GO terms
LotjaGi1g1v0770200.1
n.a. 26S protease regulatory subunit-like protein; TAIR: AT1G09100.1 26S proteasome AAA-ATPase subunit RPT5B; Swiss-Prot: sp|O04019|PS6AB_ARATH 26S protease regulatory subunit 6A homolog B; TrEMBL-Plants: tr|G7I8P7|G7I8P7_MEDTR 26S proteasome regulatory particle triple-A ATPase protein; Found in the gene: LotjaGi1g1v0770200 LjG1.1_chr1 134258735 134262697 -
2 domain predictions
3 GO terms
LotjaGi1g1v0770200.2
n.a. 26S protease regulatory subunit-like protein; TAIR: AT1G09100.1 26S proteasome AAA-ATPase subunit RPT5B; Swiss-Prot: sp|O04019|PS6AB_ARATH 26S protease regulatory subunit 6A homolog B; TrEMBL-Plants: tr|G7I8P7|G7I8P7_MEDTR 26S proteasome regulatory particle triple-A ATPase protein; Found in the gene: LotjaGi1g1v0770200 LjG1.1_chr1 134259116 134262314 -
2 domain predictions
3 GO terms
LotjaGi1g1v0770200.3
n.a. 26S protease regulatory subunit-like protein; TAIR: AT1G09100.1 26S proteasome AAA-ATPase subunit RPT5B; Swiss-Prot: sp|O04019|PS6AB_ARATH 26S protease regulatory subunit 6A homolog B; TrEMBL-Plants: tr|G7I8P7|G7I8P7_MEDTR 26S proteasome regulatory particle triple-A ATPase protein; Found in the gene: LotjaGi1g1v0770200 LjG1.1_chr1 134259124 134262365 -
2 domain predictions
3 GO terms
LotjaGi1g1v0798800.1
n.a. 26S protease regulatory subunit; TAIR: AT1G53750.1 regulatory particle triple-A 1A; Swiss-Prot: sp|O64982|PRS7_PRUPE 26S protease regulatory subunit 7; TrEMBL-Plants: tr|A0A0B2Q3J3|A0A0B2Q3J3_GLYSO 26S protease regulatory subunit 7; Found in the gene: LotjaGi1g1v0798800 LjG1.1_chr1 136930562 136939247 -
2 domain predictions
3 GO terms
LotjaGi1g1v0798800.2
n.a. 26S protease regulatory subunit, putative; TAIR: AT1G53750.1 regulatory particle triple-A 1A; Swiss-Prot: sp|O64982|PRS7_PRUPE 26S protease regulatory subunit 7; TrEMBL-Plants: tr|A0A0B2Q3J3|A0A0B2Q3J3_GLYSO 26S protease regulatory subunit 7; Found in the gene: LotjaGi1g1v0798800 LjG1.1_chr1 136935940 136939247 -
2 domain predictions
3 GO terms
LotjaGi1g1v0798800.3
n.a. 26S protease regulatory subunit; TAIR: AT1G53750.1 regulatory particle triple-A 1A; Swiss-Prot: sp|O64982|PRS7_PRUPE 26S protease regulatory subunit 7; TrEMBL-Plants: tr|A0A1J7HLA9|A0A1J7HLA9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0798800 LjG1.1_chr1 136936070 136939247 -
2 domain predictions
3 GO terms
LotjaGi3g1v0341600.1
n.a. 26S protease regulatory subunit, putative; TAIR: AT5G19990.1 regulatory particle triple-A ATPase 6A; Swiss-Prot: sp|Q9C5U3|PRS8A_ARATH 26S protease regulatory subunit 8 homolog A; TrEMBL-Plants: tr|A0A0B2S409|A0A0B2S409_GLYSO 26S protease regulatory subunit 8 like A; Found in the gene: LotjaGi3g1v0341600 LjG1.1_chr3 71638303 71643892 -
2 domain predictions
3 GO terms
LotjaGi3g1v0341600.2
n.a. 26S protease regulatory subunit, putative; TAIR: AT5G19990.1 regulatory particle triple-A ATPase 6A; Swiss-Prot: sp|Q9C5U3|PRS8A_ARATH 26S protease regulatory subunit 8 homolog A; TrEMBL-Plants: tr|A0A072UQA3|A0A072UQA3_MEDTR 26S proteasome regulatory particle triple-A ATPase protein; Found in the gene: LotjaGi3g1v0341600 LjG1.1_chr3 71639064 71642806 -
2 domain predictions
3 GO terms
LotjaGi3g1v0341600.3
n.a. 26S protease regulatory subunit, putative; TAIR: AT5G19990.1 regulatory particle triple-A ATPase 6A; Swiss-Prot: sp|Q9C5U3|PRS8A_ARATH 26S protease regulatory subunit 8 homolog A; TrEMBL-Plants: tr|A0A072UQA3|A0A072UQA3_MEDTR 26S proteasome regulatory particle triple-A ATPase protein; Found in the gene: LotjaGi3g1v0341600 LjG1.1_chr3 71639064 71643077 -
2 domain predictions
3 GO terms
LotjaGi3g1v0406600.1
n.a. 26S protease regulatory subunit; TAIR: AT1G53750.1 regulatory particle triple-A 1A; Swiss-Prot: sp|Q41365|PRS7_SPIOL 26S protease regulatory subunit 7; TrEMBL-Plants: tr|A0A1J7GVZ9|A0A1J7GVZ9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0406600 LjG1.1_chr3 80997041 81001537 -
2 domain predictions
3 GO terms
LotjaGi3g1v0406600.2
n.a. 26S protease regulatory subunit, putative; TAIR: AT1G53750.1 regulatory particle triple-A 1A; Swiss-Prot: sp|Q9SSB5|PRS7A_ARATH 26S protease regulatory subunit 7 homolog A; TrEMBL-Plants: tr|M1A1A0|M1A1A0_SOLTU Uncharacterized protein; Found in the gene: LotjaGi3g1v0406600 LjG1.1_chr3 80997731 81001310 -
2 domain predictions
3 GO terms
LotjaGi3g1v0406600.3
n.a. 26S protease regulatory subunit; TAIR: AT1G53750.1 regulatory particle triple-A 1A; Swiss-Prot: sp|Q41365|PRS7_SPIOL 26S protease regulatory subunit 7; TrEMBL-Plants: tr|A0A1J7GVZ9|A0A1J7GVZ9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0406600 LjG1.1_chr3 80997882 81001310 -
2 domain predictions
3 GO terms
LotjaGi4g1v0351800.1
n.a. 26S protease regulatory subunit; TAIR: AT5G58290.1 regulatory particle triple-A ATPase 3; Swiss-Prot: sp|Q9SEI4|PRS6B_ARATH 26S protease regulatory subunit 6B homolog; TrEMBL-Plants: tr|A0A151U9T4|A0A151U9T4_CAJCA 26S protease regulatory subunit 6B isogeny; Found in the gene: LotjaGi4g1v0351800 LjG1.1_chr4 73047804 73051613 -
2 domain predictions
3 GO terms
LotjaGi4g1v0351800.2
n.a. 26S protease regulatory subunit; TAIR: AT5G58290.1 regulatory particle triple-A ATPase 3; Swiss-Prot: sp|P54778|PRS6B_SOLTU 26S protease regulatory subunit 6B homolog; TrEMBL-Plants: tr|V7BPD9|V7BPD9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0351800 LjG1.1_chr4 73047931 73051590 -
2 domain predictions
3 GO terms
LotjaGi4g1v0351800.4
n.a. 26S protease regulatory subunit; TAIR: AT5G58290.1 regulatory particle triple-A ATPase 3; Swiss-Prot: sp|Q9SEI4|PRS6B_ARATH 26S protease regulatory subunit 6B homolog; TrEMBL-Plants: tr|A0A151U9T4|A0A151U9T4_CAJCA 26S protease regulatory subunit 6B isogeny; Found in the gene: LotjaGi4g1v0351800 LjG1.1_chr4 73048196 73051458 -
2 domain predictions
3 GO terms
LotjaGi5g1v0012100.1
n.a. 26S protease regulatory subunit; TAIR: AT1G45000.1 AAA-type ATPase family protein; Swiss-Prot: sp|Q9MAK9|PS10B_ARATH 26S protease regulatory subunit S10B homolog B; TrEMBL-Plants: tr|I3SEA8|I3SEA8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0012100 LjG1.1_chr5 2660532 2668722 +
2 domain predictions
3 GO terms
LotjaGi5g1v0124500.1
n.a. 26S protease regulatory subunit; TAIR: AT4G29040.1 regulatory particle AAA-ATPase 2A; Swiss-Prot: sp|Q9SZD4|PRS4A_ARATH 26S proteasome regulatory subunit 4 homolog A; TrEMBL-Plants: tr|A0A0R4J302|A0A0R4J302_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0124500 LjG1.1_chr5 27009158 27014993 +
2 domain predictions
3 GO terms
LotjaGi5g1v0124500.3
n.a. 26S protease regulatory subunit; TAIR: AT4G29040.1 regulatory particle AAA-ATPase 2A; Swiss-Prot: sp|Q9SZD4|PRS4A_ARATH 26S proteasome regulatory subunit 4 homolog A; TrEMBL-Plants: tr|A0A0R4J302|A0A0R4J302_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0124500 LjG1.1_chr5 27009326 27014211 +
2 domain predictions
3 GO terms
LotjaGi6g1v0045000.1
n.a. 26S protease regulatory subunit; TAIR: AT5G58290.1 regulatory particle triple-A ATPase 3; Swiss-Prot: sp|Q9SEI4|PRS6B_ARATH 26S protease regulatory subunit 6B homolog; TrEMBL-Plants: tr|A0A0R4J4L8|A0A0R4J4L8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0045000 LjG1.1_chr6 8444311 8449044 -
2 domain predictions
3 GO terms
LotjaGi6g1v0045000.4
n.a. 26S protease regulatory subunit; TAIR: AT5G58290.1 regulatory particle triple-A ATPase 3; Swiss-Prot: sp|Q9SEI4|PRS6B_ARATH 26S protease regulatory subunit 6B homolog; TrEMBL-Plants: tr|A0A0R4J4L8|A0A0R4J4L8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0045000 LjG1.1_chr6 8444916 8448529 -
2 domain predictions
3 GO terms
LotjaGi6g1v0045000.5
n.a. 26S protease regulatory subunit; TAIR: AT5G58290.1 regulatory particle triple-A ATPase 3; Swiss-Prot: sp|Q9SEI4|PRS6B_ARATH 26S protease regulatory subunit 6B homolog; TrEMBL-Plants: tr|A0A151U9T4|A0A151U9T4_CAJCA 26S protease regulatory subunit 6B isogeny; Found in the gene: LotjaGi6g1v0045000 LjG1.1_chr6 8446073 8448529 -
2 domain predictions
3 GO terms