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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0946290 |
| Transcript ID | Lj2g3v0946290.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Germin-like protein [Medicago truncatula] gi|357495757|ref|XP_003618167.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | – | – | |
| SignalP | 1 | 20 | 20 | – | – | |
| SignalP | 1 | 20 | 20 | – | – | |
| PANTHER | 1 | 220 | 220 | 7.90E-143 | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| PANTHER | 1 | 220 | 220 | 7.90E-143 | – | |
| SignalP | 1 | 20 | 20 | – | – | |
| Phobius | 4 | 15 | 12 | – | – | |
| Phobius | 16 | 20 | 5 | – | – | |
| Gene3D | 21 | 216 | 196 | 5.20E-70 | ||
| Phobius | 21 | 220 | 200 | – | – | |
| SMART | 60 | 209 | 150 | 2.60E-33 | ||
| SUPERFAMILY | 64 | 215 | 152 | 2.76E-43 | ||
| Pfam | 64 | 208 | 145 | 1.30E-46 | ||
| ProSitePatterns | 102 | 115 | 14 | – | ||
| PRINTS | 107 | 127 | 21 | 2.30E-27 | ||
| PRINTS | 139 | 159 | 21 | 2.30E-27 | ||
| PRINTS | 172 | 187 | 16 | 2.30E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Manganese ion binding | Interacting selectively and non-covalently with manganese (Mn) ions. | ||
| Molecular function | Nutrient reservoir activity | Functions in the storage of nutritious substrates. |
Expression pattern of Lj2g3v0946290.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0946290.1, powered by CORGI.
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