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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1266120 |
| Transcript ID | Lj2g3v1266120.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | RING/U-box superfamily protein [Theobroma cacao] gi|508709866|gb|EOY01763.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 89 | 89 | – | – | |
| PANTHER | 17 | 261 | 245 | 4.20E-129 | – | |
| PANTHER | 17 | 261 | 245 | 4.20E-129 | – | |
| Gene3D | 36 | 100 | 65 | 1.10E-09 | ||
| SUPERFAMILY | 40 | 102 | 63 | 9.42E-09 | – | |
| Pfam | 45 | 85 | 41 | 3.60E-08 | ||
| ProSiteProfiles | 45 | 100 | 56 | 9.76 | ||
| ProSitePatterns | 64 | 73 | 10 | – | ||
| Phobius | 90 | 108 | 19 | – | – | |
| Phobius | 109 | 197 | 89 | – | – | |
| TMHMM | 198 | 220 | 23 | – | – | |
| Phobius | 198 | 220 | 23 | – | – | |
| Phobius | 221 | 225 | 5 | – | – | |
| TMHMM | 225 | 247 | 23 | – | – | |
| Phobius | 226 | 249 | 24 | – | – | |
| Phobius | 250 | 261 | 12 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj2g3v1266120.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1266120.1, powered by CORGI.
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