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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1744990 |
| Transcript ID | Lj2g3v1744990.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ATPase family AAA domain-containing protein 3-like [Glycine max] gi|356538198|ref|XP_003537591.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 22 | 22 | – | – | |
| PANTHER | 1 | 630 | 630 | 0 | – | |
| SignalP | 1 | 17 | 17 | – | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| PANTHER | 1 | 630 | 630 | 0 | – | |
| Phobius | 6 | 17 | 12 | – | – | |
| Phobius | 18 | 22 | 5 | – | – | |
| Phobius | 23 | 630 | 608 | – | – | |
| MobiDBLite | 39 | 75 | 37 | – | – | |
| Pfam | 54 | 320 | 267 | 9.30E-94 | ||
| Coils | 125 | 155 | 31 | – | – | |
| MobiDBLite | 145 | 213 | 69 | – | – | |
| Coils | 179 | 220 | 42 | – | – | |
| Gene3D | 359 | 577 | 219 | 5.30E-39 | ||
| SUPERFAMILY | 360 | 613 | 254 | 1.95E-40 | ||
| CDD | 371 | 517 | 147 | 7.74E-18 | – | |
| SMART | 386 | 519 | 134 | 1.80E-14 | ||
| Pfam | 390 | 517 | 128 | 3.00E-25 | ||
| ProSitePatterns | 489 | 508 | 20 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of Lj2g3v1744990.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1744990.1, powered by CORGI.
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