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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1828320 |
| Transcript ID | Lj2g3v1828320.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | LysM type receptor kinase [Lotus japonicus] gi|290490598|dbj|BAI79286.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 35 | 35 | – | – | |
| Phobius | 1 | 17 | 17 | – | – | |
| Phobius | 1 | 35 | 35 | – | – | |
| TMHMM | 13 | 35 | 23 | – | – | |
| Phobius | 18 | 30 | 13 | – | – | |
| Phobius | 31 | 35 | 5 | – | – | |
| Phobius | 36 | 281 | 246 | – | – | |
| SMART | 135 | 180 | 46 | 2.7 | ||
| SMART | 200 | 245 | 46 | 0.051 | ||
| Gene3D | 201 | 245 | 45 | 2.70E-05 | ||
| Pfam | 202 | 245 | 44 | 0.0028 | ||
| PANTHER | 237 | 640 | 404 | 2.10E-198 | – | |
| PANTHER | 237 | 640 | 404 | 2.10E-198 | – | |
| Gene3D | 250 | 368 | 119 | 9.60E-07 | ||
| MobiDBLite | 251 | 277 | 27 | – | – | |
| TMHMM | 281 | 303 | 23 | – | – | |
| Phobius | 282 | 303 | 22 | – | – | |
| Phobius | 304 | 643 | 340 | – | – | |
| ProSiteProfiles | 329 | 625 | 297 | 32.117 | ||
| SUPERFAMILY | 349 | 625 | 277 | 2.22E-62 | ||
| SMART | 369 | 625 | 257 | 2.00E-19 | ||
| Gene3D | 369 | 414 | 46 | 2.90E-11 | – | |
| Pfam | 374 | 622 | 249 | 8.20E-39 | ||
| Gene3D | 415 | 622 | 208 | 1.90E-42 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj2g3v1828320.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1828320.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.