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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1988700 |
| Transcript ID | Lj2g3v1988700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Pleckstrin (PH) domain-containing protein isoform 2 [Theobroma cacao] gi|508776870|gb|EOY24126.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 1064 | 1063 | 0 | ||
| PANTHER | 2 | 1064 | 1063 | 0 | – | |
| Pfam | 2 | 107 | 106 | 2.10E-31 | ||
| Pfam | 133 | 374 | 242 | 4.20E-66 | ||
| Pfam | 558 | 778 | 221 | 2.70E-35 | ||
| SUPERFAMILY | 792 | 911 | 120 | 9.81E-14 | ||
| Gene3D | 794 | 909 | 116 | 3.20E-19 | ||
| ProSiteProfiles | 796 | 908 | 113 | 10.373 | ||
| SMART | 797 | 910 | 114 | 9.50E-12 | ||
| CDD | 799 | 903 | 105 | 8.83E-05 | – | |
| Pfam | 799 | 907 | 109 | 2.50E-10 | ||
| PANTHER | 1185 | 2974 | 1790 | 0 | ||
| PANTHER | 1185 | 2974 | 1790 | 0 | – | |
| Pfam | 1994 | 2151 | 158 | 2.10E-11 | ||
| Pfam | 2223 | 2370 | 148 | 7.40E-11 | ||
| SMART | 2875 | 2933 | 59 | 0.0079 | ||
| PANTHER | 3063 | 4142 | 1080 | 0 | ||
| PANTHER | 3063 | 4142 | 1080 | 0 | – | |
| Pfam | 3331 | 3497 | 167 | 2.10E-12 | ||
| MobiDBLite | 4326 | 4350 | 25 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj2g3v1988700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1988700.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.