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PF12624

Source: Pfam

Description

N-terminal region of Chorein or VPS13

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 17

Transcript Name Description Predicted domains Domain count
Lj0g3v0111239.1
– Uncharacterized protein isoform 1 [Theobroma cacao] gi|508720697|gb|EOY12594.1|
Domains
6
Lj0g3v0313759.1
– Autophagy-related protein [Medicago truncatula] gi|357475421|ref|XP_003607996.1|
Domains
11
Lj0g3v0313759.2
– Autophagy-related protein [Medicago truncatula] gi|357475421|ref|XP_003607996.1|
Domains
8
Lj1g3v4690380.1
– Vacuolar protein sorting-associated protein 13A [Medicago truncatula] gi|357482269|ref|XP_003611420.1|
Domains
7
Lj2g3v1988700.2
– Pleckstrin (PH) domain-containing protein isoform 2 [Theobroma cacao] gi|508776870|gb|EOY24126.1|
Domains
24
Lj3g3v1011180.2
– Uncharacterized protein isoform 1 [Theobroma cacao] gi|508720697|gb|EOY12594.1|
Domains
6
Lj4g3v1930960.1
– Vacuolar protein sorting-associated protein vps13 (exp=-1; wgp=0; cg=1, related [Medicago truncatula] gi|124360283|gb|ABN08296.1|
Domains
6
Lj4g3v2250370.1
– Vacuolar protein sorting-associated protein 13A [Medicago truncatula] gi|357479115|ref|XP_003609843.1|
Domains
5
LotjaGi1g1v0116300.1
– Vacuolar protein sorting-associated protein, putative; TAIR: AT5G24740.2 vacuolar protein sorting-associated protein, putative (DUF1162); Swiss-Prot: sp|Q54LB8|VP13A_DICDI Putative vacuolar protein sorting-associated protein 13A; TrEMBL-Plants: tr|G7IJW3|G7IJW3_MEDTR Vacuolar protein sorting-associated protein, putative; Found in the gene: LotjaGi1g1v0116300
Domains
15
LotjaGi2g1v0417400.1
– Pleckstrin (PH) domain-containing protein isoform 2; TAIR: AT4G17140.3 pleckstrin homology (PH) domain-containing protein; Swiss-Prot: sp|Q8BX70|VP13C_MOUSE Vacuolar protein sorting-associated protein 13C; TrEMBL-Plants: tr|G7JYP4|G7JYP4_MEDTR Vacuolar protein sorting protein; Found in the gene: LotjaGi2g1v0417400
Domains
24
LotjaGi3g1v0150800.1
– UHRF1-binding protein 1; TAIR: AT3G20720.2 amino-terminal region of chorein; Swiss-Prot: sp|Q6BDS2|URFB1_HUMAN UHRF1-binding protein 1; TrEMBL-Plants: tr|A0A1J7GZD2|A0A1J7GZD2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0150800
Domains
6
LotjaGi3g1v0235500.1
– UHRF1-binding protein 1-like; TAIR: AT3G20720.2 amino-terminal region of chorein; Swiss-Prot: sp|A2RSJ4|UH1BL_MOUSE UHRF1-binding protein 1-like; TrEMBL-Plants: tr|K7LW91|K7LW91_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0235500
Domains
6
LotjaGi4g1v0073100.1
– Autophagy-related protein 2; TAIR: AT3G19190.2 autophagy 2; Swiss-Prot: sp|F8S296|ATG2_ARATH Autophagy-related protein 2; TrEMBL-Plants: tr|G7JLA6|G7JLA6_MEDTR Autophagy protein; Found in the gene: LotjaGi4g1v0073100
Domains
9
LotjaGi4g1v0073100.2
– Autophagy-related protein 2; TAIR: AT3G19190.2 autophagy 2; Swiss-Prot: sp|F8S296|ATG2_ARATH Autophagy-related protein 2; TrEMBL-Plants: tr|G7JLA6|G7JLA6_MEDTR Autophagy protein; Found in the gene: LotjaGi4g1v0073100
Domains
11
LotjaGi4g1v0279000.1
– Vacuolar protein sorting-associated protein, putative; TAIR: AT5G24740.2 vacuolar protein sorting-associated protein, putative (DUF1162); Swiss-Prot: sp|Q54LB8|VP13A_DICDI Putative vacuolar protein sorting-associated protein 13A; TrEMBL-Plants: tr|G7IJW3|G7IJW3_MEDTR Vacuolar protein sorting-associated protein, putative; Found in the gene: LotjaGi4g1v0279000
Domains
15
LotjaGi4g1v0334900.1
– Calcium-dependent lipid-binding family protein isoform protein; TAIR: AT1G48090.4 calcium-dependent lipid-binding family protein; Swiss-Prot: sp|Q54LB8|VP13A_DICDI Putative vacuolar protein sorting-associated protein 13A; TrEMBL-Plants: tr|A0A072V2R4|A0A072V2R4_MEDTR Calcium-dependent lipid-binding-like protein; Found in the gene: LotjaGi4g1v0334900
Domains
28
LotjaGi4g1v0334900.4
– Calcium-dependent lipid-binding family protein isoform protein; TAIR: AT1G48090.4 calcium-dependent lipid-binding family protein; Swiss-Prot: sp|Q54LB8|VP13A_DICDI Putative vacuolar protein sorting-associated protein 13A; TrEMBL-Plants: tr|A0A072V2R4|A0A072V2R4_MEDTR Calcium-dependent lipid-binding-like protein; Found in the gene: LotjaGi4g1v0334900
Domains
28

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 5.88