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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0128220 |
| Transcript ID | Lj3g3v0128220.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max] gi|356555825|ref|XP_003546230.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 434 | 434 | 0 | – | |
| Phobius | 1 | 206 | 206 | – | – | |
| PANTHER | 1 | 434 | 434 | 0 | – | |
| Gene3D | 4 | 121 | 118 | 8.20E-16 | ||
| SUPERFAMILY | 4 | 124 | 121 | 7.24E-17 | ||
| Pfam | 190 | 402 | 213 | 2.70E-46 | ||
| TMHMM | 206 | 228 | 23 | – | – | |
| Phobius | 207 | 228 | 22 | – | – | |
| Phobius | 229 | 239 | 11 | – | – | |
| Phobius | 240 | 260 | 21 | – | – | |
| TMHMM | 240 | 262 | 23 | – | – | |
| Phobius | 261 | 290 | 30 | – | – | |
| Phobius | 291 | 313 | 23 | – | – | |
| TMHMM | 291 | 313 | 23 | – | – | |
| Phobius | 314 | 324 | 11 | – | – | |
| Phobius | 325 | 344 | 20 | – | – | |
| TMHMM | 326 | 345 | 20 | – | – | |
| Phobius | 345 | 349 | 5 | – | – | |
| Phobius | 350 | 372 | 23 | – | – | |
| TMHMM | 350 | 372 | 23 | – | – | |
| Phobius | 373 | 428 | 56 | – | – | |
| Pfam | 409 | 466 | 58 | 5.10E-21 | ||
| Phobius | 429 | 453 | 25 | – | – | |
| TMHMM | 429 | 451 | 23 | – | – | |
| Phobius | 454 | 857 | 404 | – | – | |
| PANTHER | 499 | 1111 | 613 | 0 | – | |
| PANTHER | 499 | 1111 | 613 | 0 | – | |
| CDD | 509 | 747 | 239 | 1.44E-101 | ||
| ProSiteProfiles | 512 | 764 | 253 | 13.979 | ||
| SUPERFAMILY | 534 | 747 | 214 | 4.17E-38 | ||
| Gene3D | 535 | 747 | 213 | 5.60E-42 | ||
| Pfam | 540 | 692 | 153 | 3.60E-20 | ||
| SMART | 549 | 741 | 193 | 7.30E-11 | ||
| Pfam | 838 | 1051 | 214 | 1.70E-56 | ||
| TMHMM | 856 | 875 | 20 | – | – | |
| Phobius | 858 | 876 | 19 | – | – | |
| Phobius | 877 | 887 | 11 | – | – | |
| Phobius | 888 | 905 | 18 | – | – | |
| TMHMM | 888 | 905 | 18 | – | – | |
| Phobius | 906 | 943 | 38 | – | – | |
| TMHMM | 937 | 959 | 23 | – | – | |
| Phobius | 944 | 964 | 21 | – | – | |
| Phobius | 965 | 970 | 6 | – | – | |
| Phobius | 971 | 995 | 25 | – | – | |
| TMHMM | 972 | 994 | 23 | – | – | |
| Phobius | 996 | 1000 | 5 | – | – | |
| TMHMM | 999 | 1021 | 23 | – | – | |
| Phobius | 1001 | 1020 | 20 | – | – | |
| Phobius | 1021 | 1031 | 11 | – | – | |
| TMHMM | 1028 | 1050 | 23 | – | – | |
| Phobius | 1032 | 1051 | 20 | – | – | |
| Phobius | 1052 | 1079 | 28 | – | – | |
| TMHMM | 1079 | 1101 | 23 | – | – | |
| Phobius | 1080 | 1103 | 24 | – | – | |
| Phobius | 1104 | 1111 | 8 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of Lj3g3v0128220.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0128220.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.