Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj3g3v0310070.1

Overview

Field Value
Gene ID Lj3g3v0310070
Transcript ID Lj3g3v0310070.1
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: receptor-like serine/threonine-protein kinase ALE2-like [Glycine max] gi|356547351|ref|XP_003542077.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 370 370
SignalP 1 17 17
SignalP 1 26 26
MobiDBLite 19 190 172
PANTHER 138 196 59 0
PANTHER 138 196 59 0
PANTHER 212 219 8 0
PANTHER 212 219 8 0
PANTHER 320 413 94 0
PANTHER 320 413 94 0
Gene3D 358 480 123 2.00E-09
Phobius 371 392 22
TMHMM 372 394 23
Phobius 393 783 391
PANTHER 443 772 330 0
PANTHER 443 772 330 0
SUPERFAMILY 445 740 296 9.43E-81
ProSiteProfiles 467 743 277 37.559
Pfam 471 740 270 2.80E-48
ProSitePatterns 473 495 23
CDD 473 741 269 5.72E-97
Gene3D 481 531 51 8.60E-26
Gene3D 532 740 209 1.10E-41
ProSitePatterns 589 601 13

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of Lj3g3v0310070.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0310070.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.