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Lj3g3v0397150.2

Overview

Field Value
Gene ID Lj3g3v0397150
Transcript ID Lj3g3v0397150.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: GTPase obg-like [Cicer arietinum] gi|502115632|ref|XP_004495251.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11702:SF31
23 142 120 3.70E-175 –
PANTHER
PTHR11702
23 142 120 3.70E-175 –
PIRSF
PIRSF002401
46 508 463 1.10E-90
IPR014100
SUPERFAMILY
SSF82051
49 140 92 7.85E-30
IPR006169
Gene3D
G3DSA:2.70.210.12
50 147 98 5.90E-34
IPR006169
Pfam
PF01018
50 141 92 2.70E-26
IPR006169
MobiDBLite
mobidb-lite
61 88 28 – –
MobiDBLite
mobidb-lite
182 201 20 – –
PANTHER
PTHR11702:SF31
241 294 54 3.70E-175 –
PANTHER
PTHR11702
241 294 54 3.70E-175 –
SUPERFAMILY
SSF82051
244 291 48 7.85E-30
IPR006169
Gene3D
G3DSA:2.70.210.12
251 291 41 5.90E-34
IPR006169
PANTHER
PTHR11702:SF31
312 503 192 3.70E-175 –
PANTHER
PTHR11702
312 503 192 3.70E-175 –
Gene3D
G3DSA:3.40.50.300
328 504 177 2.30E-46
IPR027417
ProSiteProfiles
PS51710
328 500 173 60.253
IPR031167
CDD
cd01898
328 499 172 1.18E-75 –
SUPERFAMILY
SSF52540
329 498 170 8.99E-43
IPR027417
Pfam
PF01926
330 455 126 3.70E-24
IPR006073
PRINTS
PR00326
330 350 21 2.10E-28
IPR006073
PRINTS
PR00326
351 369 19 2.10E-28
IPR006073
PRINTS
PR00326
378 393 16 2.10E-28
IPR006073
PRINTS
PR00326
395 413 19 2.10E-28
IPR006073

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000287
Molecular function Magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
Subterm of
GO:0003924
Molecular function GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
Subterm of
GO:0005525
Molecular function GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
Subterm of

Genome browser

LORE1 insertions 1

Expression data

Expression pattern

Expression pattern of Lj3g3v0397150.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0397150.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.