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Lj3g3v0509890.1

Overview

Field Value
Gene ID Lj3g3v0509890
Transcript ID Lj3g3v0509890.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: chaperone protein dnaJ 2-like [Glycine max] gi|356504601|ref|XP_003521084.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24078:SF192
4 384 381 1.30E-289 –
PANTHER
PTHR24078
4 384 381 1.30E-289 –
SUPERFAMILY
SSF46565
9 109 101 9.94E-35
IPR001623
Hamap
MF_01152
10 370 361 26.484
IPR012724
Gene3D
G3DSA:1.10.287.110
10 102 93 3.40E-35
IPR001623
SMART
SM00271
12 66 55 1.40E-27
IPR001623
ProSiteProfiles
PS50076
13 74 62 22.761
IPR001623
Pfam
PF00226
14 71 58 5.20E-22
IPR001623
CDD
cd06257
14 63 50 1.08E-19
IPR001623
PRINTS
PR00625
15 33 19 2.00E-21
IPR001623
PRINTS
PR00625
46 66 21 2.00E-21
IPR001623
PRINTS
PR00625
66 85 20 2.00E-21
IPR001623
Gene3D
G3DSA:2.60.260.20
119 150 32 1.70E-27 –
SUPERFAMILY
SSF49493
119 153 35 1.44E-16
IPR008971
CDD
cd10747
119 345 227 1.57E-42 –
Pfam
PF01556
122 343 222 1.10E-41
IPR002939
ProSiteProfiles
PS51188
135 219 85 23.033
IPR001305
SUPERFAMILY
SSF57938
145 216 72 5.10E-16
IPR001305
CDD
cd10719
148 214 67 1.70E-18 –
Pfam
PF00684
148 214 67 2.30E-14
IPR001305
Gene3D
G3DSA:2.10.230.10
151 214 64 2.70E-16
IPR001305
Gene3D
G3DSA:2.60.260.20
216 261 46 1.70E-27 –
SUPERFAMILY
SSF49493
220 263 44 1.44E-16
IPR008971
SUPERFAMILY
SSF49493
265 345 81 4.84E-19
IPR008971
Gene3D
G3DSA:2.60.260.20
265 344 80 4.70E-27 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006457
Biological process Protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
Subterm of
GO:0009408
Biological process Response to heat Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
Subterm of
GO:0031072
Molecular function Heat shock protein binding Interacting selectively and non-covalently with a heat shock protein, any protein synthesized or activated in response to heat shock.
Subterm of
GO:0051082
Molecular function Unfolded protein binding Interacting selectively and non-covalently with an unfolded protein.
Subterm of

Genome browser

LORE1 insertions 14

Expression data

Expression pattern

Expression pattern of Lj3g3v0509890.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0509890.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.