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Lj3g3v0618160.2

Overview

Field Value
Gene ID Lj3g3v0618160
Transcript ID Lj3g3v0618160.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: dynamin-related protein 1E-like [Cicer arietinum] gi|502155644|ref|XP_004510142.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11566:SF80
1 629 629 0 –
Gene3D
G3DSA:3.40.50.300
1 312 312 2.50E-126
IPR027417
PANTHER
PTHR11566
1 629 629 0
IPR022812
SMART
SM00053
1 254 254 9.70E-110
IPR001401
SUPERFAMILY
SSF52540
28 311 284 1.02E-71
IPR027417
ProSiteProfiles
PS51718
34 303 270 59.605
IPR030381
CDD
cd08771
37 303 267 3.41E-128 –
PRINTS
PR00195
37 55 19 3.30E-58
IPR022812
Pfam
PF00350
40 215 176 7.40E-52
IPR022812
PRINTS
PR00195
62 79 18 3.30E-58
IPR022812
ProSitePatterns
PS00410
63 72 10 –
IPR019762
PRINTS
PR00195
135 152 18 3.30E-58
IPR022812
PRINTS
PR00195
185 203 19 3.30E-58
IPR022812
PRINTS
PR00195
204 220 17 3.30E-58
IPR022812
Pfam
PF01031
225 492 268 5.10E-63
IPR000375
PRINTS
PR00195
227 246 20 3.30E-58
IPR022812
MobiDBLite
mobidb-lite
503 531 29 – –
SMART
SM00302
534 627 94 3.90E-33
IPR003130
Pfam
PF02212
536 627 92 1.10E-24
IPR003130
ProSiteProfiles
PS51388
539 631 93 21.281
IPR020850

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003924
Molecular function GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
Subterm of
GO:0005525
Molecular function GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
Subterm of

Genome browser

LORE1 insertions 12

Expression data

Expression pattern

Expression pattern of Lj3g3v0618160.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0618160.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.