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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0850590 |
| Transcript ID | Lj3g3v0850590.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: E3 ubiquitin-protein ligase makorin-like [Glycine max] gi|356557148|ref|XP_003546880.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 28 | 28 | 14.671 | ||
| PANTHER | 3 | 449 | 447 | 3.90E-171 | – | |
| PANTHER | 3 | 449 | 447 | 3.90E-171 | – | |
| SMART | 3 | 27 | 25 | 9.70E-04 | ||
| SUPERFAMILY | 4 | 26 | 23 | 1.06E-06 | ||
| ProSiteProfiles | 29 | 56 | 28 | 14.756 | ||
| SMART | 29 | 55 | 27 | 3.00E-04 | ||
| SUPERFAMILY | 30 | 53 | 24 | 3.66E-05 | ||
| Pfam | 33 | 54 | 22 | 3.70E-07 | ||
| Gene3D | 33 | 53 | 21 | 2.40E-05 | ||
| MobiDBLite | 62 | 121 | 60 | – | – | |
| ProSiteProfiles | 127 | 153 | 27 | 6.662 | ||
| SMART | 127 | 152 | 26 | 100 | ||
| SUPERFAMILY | 186 | 260 | 75 | 5.81E-13 | – | |
| Gene3D | 186 | 256 | 71 | 7.60E-11 | ||
| CDD | 192 | 255 | 64 | 1.64E-04 | – | |
| SMART | 193 | 253 | 61 | 6.60E-06 | ||
| ProSiteProfiles | 193 | 254 | 62 | 12.106 | ||
| Pfam | 193 | 253 | 61 | 1.10E-06 | ||
| ProSitePatterns | 217 | 226 | 10 | – | ||
| ProSiteProfiles | 283 | 312 | 30 | 10.577 | ||
| SMART | 283 | 311 | 29 | 6.5 | ||
| MobiDBLite | 431 | 452 | 22 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of Lj3g3v0850590.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0850590.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.