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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1010980 |
| Transcript ID | Lj3g3v1010980.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 44 | 44 | – | – | |
| Pfam | 88 | 222 | 135 | 5.50E-38 | ||
| PANTHER | 143 | 266 | 124 | 0 | – | |
| PANTHER | 143 | 266 | 124 | 0 | – | |
| PANTHER | 333 | 999 | 667 | 0 | – | |
| PANTHER | 333 | 999 | 667 | 0 | – | |
| Pfam | 395 | 548 | 154 | 8.50E-41 | ||
| MobiDBLite | 444 | 463 | 20 | – | – | |
| MobiDBLite | 657 | 710 | 54 | – | – | |
| Coils | 670 | 690 | 21 | – | – | |
| CDD | 737 | 875 | 139 | 6.36E-38 | – | |
| ProSiteProfiles | 740 | 874 | 135 | 12.668 | ||
| SMART | 740 | 874 | 135 | 9.80E-44 | ||
| Pfam | 742 | 874 | 133 | 4.00E-19 | ||
| SMART | 914 | 1003 | 90 | 0.21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Chromatin binding | Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase. |
Expression pattern of Lj3g3v1010980.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1010980.1, powered by CORGI.
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