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BAH domain profile.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Chromatin binding | Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase. |
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Cicer arietinum] gi|502154028|ref|XP_004509555.1| | 25 | ||
– | PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Cicer arietinum] gi|502154028|ref|XP_004509555.1| | 33 | ||
– | Agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein [Arabidopsis thaliana] gi|22327858|ref|NP_200371.2| | 10 | ||
– | PREDICTED: BAH and coiled-coil domain-containing protein 1-like [Glycine max] gi|356543233|ref|XP_003540067.1| | 18 | ||
– | Agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein [Arabidopsis thaliana] gi|22327858|ref|NP_200371.2| | 9 | ||
– | PREDICTED: BAH and coiled-coil domain-containing protein 1-like [Glycine max] gi|356516937|ref|XP_003527148.1| | 17 | ||
– | PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like isoform X2 [Cicer arietinum] gi|502164095|ref|XP_004513047.1| | 18 | ||
– | PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like isoform X2 [Cicer arietinum] gi|502164095|ref|XP_004513047.1| | 11 | ||
– | DNA (cytosine-5)-methyltransferase [Medicago truncatula] gi|357498929|ref|XP_003619753.1| | 10 | ||
– | BAH domain,TFIIS helical bundle-like domain isoform 1 [Theobroma cacao] gi|508773378|gb|EOY20634.1| | 15 | ||
– | PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like isoform X2 [Cicer arietinum] gi|502164095|ref|XP_004513047.1| | 25 | ||
– | Bromo-adjacent homology (BAH) domain-containing protein [Arabidopsis thaliana] gi|334187617|ref|NP_196708.5| | 8 | ||
– | PREDICTED: BAH and coiled-coil domain-containing protein 1-like [Glycine max] gi|356516937|ref|XP_003527148.1| | 18 | ||
– | PREDICTED: serine-rich adhesin for platelets-like isoform X1 [Cicer arietinum] gi|502090725|ref|XP_004489321.1| | 16 | ||
– | Agenet and bromo-adjacent homology (BAH) domain-containing protein-like protein [Medicago truncatula] gi|357488501|ref|XP_003614538.1| | 11 | ||
– | PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max] gi|356540854|ref|XP_003538899.1| | 26 | ||
– | PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max] gi|356495335|ref|XP_003516534.1| | 28 | ||
– | BAH and coiled-coil domain-containing protein [Medicago truncatula] gi|357481593|ref|XP_003611082.1| | 12 | ||
– | PHD finger protein [Medicago truncatula] gi|357494725|ref|XP_003617651.1| | 18 | ||
– | Nucleic acid binding protein [Arabidopsis thaliana] gi|334185373|ref|NP_001189902.1| | 6 | ||
– | PREDICTED: BAH and coiled-coil domain-containing protein 1-like [Glycine max] gi|356543233|ref|XP_003540067.1| | 17 | ||
– | DNA (cytosine-5)-methyltransferase [Medicago truncatula] gi|357498929|ref|XP_003619753.1| | 25 | ||
– | 11 | |||
– | PREDICTED: origin recognition complex subunit 1-like [Glycine max] gi|356557695|ref|XP_003547149.1| | 26 | ||
– | Os01g0610300 [Oryza sativa Japonica Group] gi|115438452|ref|NP_001043543.1| | 5 | ||
– | BAH and coiled-coil domain-containing protein [Medicago truncatula] gi|357481593|ref|XP_003611082.1| | 15 | ||
– | BAH and coiled-coil domain-containing protein [Medicago truncatula] gi|357481593|ref|XP_003611082.1| | 15 | ||
– | Agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein [Arabidopsis thaliana] gi|22327858|ref|NP_200371.2| | 11 | ||
– | Agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein [Arabidopsis thaliana] gi|22327858|ref|NP_200371.2| | 12 | ||
– | PHD-finger protein; TAIR: AT4G08990.1 DNA (cytosine-5-)-methyltransferase family protein; Swiss-Prot: sp|O83437|Y422_TREPA Uncharacterized protein TP_0422; TrEMBL-Plants: tr|I1JJE7|I1JJE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0023400 | 6 | ||
– | BAH domain-containing protein, putative; TAIR: AT3G48050.1 protein SUO; Swiss-Prot: sp|F4KFC7|MD26C_ARATH Probable mediator of RNA polymerase II transcription subunit 26c; TrEMBL-Plants: tr|K7KVT9|K7KVT9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0183300 | 17 | ||
– | Bromo-adjacent-like (BAH) domain protein; TAIR: AT5G11470.1 bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|Q9LYE3|ASI1_ARATH Protein ANTI-SILENCING 1; TrEMBL-Plants: tr|V7AU44|V7AU44_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0398900 | 8 | ||
– | Bromo-adjacent-like (BAH) domain protein; TAIR: AT5G11470.1 bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|Q9LYE3|ASI1_ARATH Protein ANTI-SILENCING 1; TrEMBL-Plants: tr|A0A151TDS8|A0A151TDS8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0398900 | 7 | ||
– | BAH-PHD domain-containing protein; TAIR: AT4G39100.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|Q9FEN9|SHL_ARATH Chromatin remodeling protein SHL; TrEMBL-Plants: tr|I1K738|I1K738_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0564200 | 22 | ||
– | Cytosine-specific methyltransferase; TAIR: AT5G49160.1 methyltransferase 1; Swiss-Prot: sp|P34881|DNMT1_ARATH DNA (cytosine-5)-methyltransferase 1; TrEMBL-Plants: tr|I1JXB2|I1JXB2_SOYBN Cytosine-specific methyltransferase; Found in the gene: LotjaGi2g1v0168300 | 29 | ||
– | Cytosine-specific methyltransferase; TAIR: AT5G49160.1 methyltransferase 1; Swiss-Prot: sp|P34881|DNMT1_ARATH DNA (cytosine-5)-methyltransferase 1; TrEMBL-Plants: tr|I1KCC0|I1KCC0_SOYBN Cytosine-specific methyltransferase; Found in the gene: LotjaGi2g1v0168300 | 29 | ||
– | Cytosine-specific methyltransferase; TAIR: AT1G69770.1 chromomethylase 3; Swiss-Prot: sp|Q94F88|CMT3_ARATH DNA (cytosine-5)-methyltransferase CMT3; TrEMBL-Plants: tr|K7K149|K7K149_SOYBN Cytosine-specific methyltransferase; Found in the gene: LotjaGi2g1v0224800 | 36 | ||
– | BAH domain-containing protein; TAIR: AT3G48060.1 BAH and TFIIS domain-containing protein; Swiss-Prot: sp|F4KFC7|MD26C_ARATH Probable mediator of RNA polymerase II transcription subunit 26c; TrEMBL-Plants: tr|A0A0B2Q028|A0A0B2Q028_GLYSO Uncharacterized protein; Found in the gene: LotjaGi2g1v0249800 | 19 | ||
– | Agenet domain-containing protein / bromo-adjacent domain-containing protein, putative; TAIR: AT1G68580.2 Agenet and bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|Q9FZD9|DUF3_ARATH DUF724 domain-containing protein 3; TrEMBL-Plants: tr|K7K2M6|K7K2M6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0278400 | 13 | ||
– | Cytosine-specific methyltransferase; TAIR: AT1G80740.1 chromomethylase 1; Swiss-Prot: sp|C0SQ89|CMT3_ORYSJ DNA (cytosine-5)-methyltransferase CMT3; TrEMBL-Plants: tr|I1J8E3|I1J8E3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0356800 | 29 | ||
– | Bromo-adjacent-like (BAH) domain protein; TAIR: AT4G11560.1 bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|G7KC24|G7KC24_MEDTR Bromo-adjacent-like (BAH) domain protein; Found in the gene: LotjaGi2g1v0434400 | 18 | ||
– | Bromo-adjacent-like (BAH) domain protein; TAIR: AT3G15605.4 nucleic acid binding protein; Swiss-Prot: sp|Q9LYE3|ASI1_ARATH Protein ANTI-SILENCING 1; TrEMBL-Plants: tr|K7M3X0|K7M3X0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0012600 | 11 | ||
– | Bromo-adjacent-like (BAH) domain protein; TAIR: AT3G15605.4 nucleic acid binding protein; Swiss-Prot: sp|Q9LYE3|ASI1_ARATH Protein ANTI-SILENCING 1; TrEMBL-Plants: tr|K7M3X0|K7M3X0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0012600 | 11 | ||
– | BAH-PHD domain-containing protein; TAIR: AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|I1M332|I1M332_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0043800 | 20 | ||
– | PHD finger family protein / bromo-adjacent (BAH) domain-containing protein isoform 1; TAIR: AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|K7KWV9|K7KWV9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0043800 | 12 | ||
– | BAH-PHD domain-containing protein; TAIR: AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|I1M332|I1M332_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0043800 | 20 | ||
– | BAH-PHD domain-containing protein; TAIR: AT4G22140.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|I1M332|I1M332_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0043800 | 19 | ||
– | BAH-PHD domain-containing protein; TAIR: AT4G22140.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|A0A0B2RYF3|A0A0B2RYF3_GLYSO BAH and coiled-coil domain-containing protein 1; Found in the gene: LotjaGi3g1v0043800 | 20 | ||
– | BAH-PHD domain-containing protein; TAIR: AT4G22140.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|A0A1J7FWH1|A0A1J7FWH1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0043800 | 12 | ||
– | Cytosine-specific methyltransferase; TAIR: AT5G49160.1 methyltransferase 1; Swiss-Prot: sp|P34881|DNMT1_ARATH DNA (cytosine-5)-methyltransferase 1; TrEMBL-Plants: tr|I1JXB2|I1JXB2_SOYBN Cytosine-specific methyltransferase; Found in the gene: LotjaGi3g1v0150100 | 29 | ||
– | Cytosine-specific methyltransferase; TAIR: AT5G49160.1 methyltransferase 1; Swiss-Prot: sp|P34881|DNMT1_ARATH DNA (cytosine-5)-methyltransferase 1; TrEMBL-Plants: tr|I1KCC0|I1KCC0_SOYBN Cytosine-specific methyltransferase; Found in the gene: LotjaGi3g1v0150100 | 29 | ||
– | BAH-PHD domain-containing protein; TAIR: AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|I3S5U2|I3S5U2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0154700 | 22 | ||
– | BAH-PHD domain-containing protein; TAIR: AT4G22140.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|I3S5U2|I3S5U2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0154700 | 20 | ||
– | BAH-PHD domain-containing protein; TAIR: AT4G22140.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|I3S5U2|I3S5U2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0154700 | 20 | ||
– | Origin recognition complex subunit 1; TAIR: AT4G14700.1 origin recognition complex 1; Swiss-Prot: sp|Q710E8|ORC1A_ARATH Origin of replication complex subunit 1A; TrEMBL-Plants: tr|I1M507|I1M507_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0287800 | 29 | ||
– | Origin recognition complex subunit 1; TAIR: AT4G14700.1 origin recognition complex 1; Swiss-Prot: sp|Q710E8|ORC1A_ARATH Origin of replication complex subunit 1A; TrEMBL-Plants: tr|I1M507|I1M507_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0287800 | 29 | ||
– | Origin recognition complex subunit 1; TAIR: AT4G14700.1 origin recognition complex 1; Swiss-Prot: sp|Q710E8|ORC1A_ARATH Origin of replication complex subunit 1A; TrEMBL-Plants: tr|I1M507|I1M507_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0287800 | 29 | ||
– | Cytosine-specific methyltransferase; TAIR: AT4G19020.1 chromomethylase 2; Swiss-Prot: sp|Q94F87|CMT2_ARATH DNA (cytosine-5)-methyltransferase CMT2; TrEMBL-Plants: tr|A0A0B2PQY3|A0A0B2PQY3_GLYSO Cytosine-specific methyltransferase; Found in the gene: LotjaGi4g1v0146500 | 32 | ||
– | Cytosine-specific methyltransferase; TAIR: AT4G19020.1 chromomethylase 2; Swiss-Prot: sp|Q94F87|CMT2_ARATH DNA (cytosine-5)-methyltransferase CMT2; TrEMBL-Plants: tr|A0A0B2PQY3|A0A0B2PQY3_GLYSO Cytosine-specific methyltransferase; Found in the gene: LotjaGi4g1v0146500 | 32 | ||
– | Cytosine-specific methyltransferase; TAIR: AT1G69770.1 chromomethylase 3; Swiss-Prot: sp|Q94F88|CMT3_ARATH DNA (cytosine-5)-methyltransferase CMT3; TrEMBL-Plants: tr|K7K149|K7K149_SOYBN Cytosine-specific methyltransferase; Found in the gene: LotjaGi4g1v0407700 | 35 | ||
– | Bromo-adjacent-like (BAH) domain protein; TAIR: AT4G11560.1 bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|A0A0S3QXP3|A0A0S3QXP3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0425900 | 18 | ||
– | Bromo-adjacent-like (BAH) domain protein; TAIR: AT5G11470.1 bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|Q9LYE3|ASI1_ARATH Protein ANTI-SILENCING 1; TrEMBL-Plants: tr|A0A151TDS8|A0A151TDS8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0122100 | 8 | ||
– | BAH-PHD domain-containing protein; TAIR: AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|A0A1J7FWH1|A0A1J7FWH1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0307200 | 19 | ||
– | Agenet domain-containing protein / bromo-adjacent domain-containing protein, putative; TAIR: AT5G55600.1 Agenet and bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|Q9FZD9|DUF3_ARATH DUF724 domain-containing protein 3; TrEMBL-Plants: tr|A0A0B2NVF2|A0A0B2NVF2_GLYSO Uncharacterized protein; Found in the gene: LotjaGi6g1v0144600 | 13 | ||
– | Agenet domain-containing protein / bromo-adjacent domain-containing protein, putative; TAIR: AT5G55600.1 Agenet and bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4I8W1|DUF2_ARATH DUF724 domain-containing protein 2; TrEMBL-Plants: tr|K7LB84|K7LB84_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0284100 | 13 | ||
– | Agenet domain-containing protein / bromo-adjacent domain-containing protein, putative; TAIR: AT5G55600.1 Agenet and bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4I8W1|DUF2_ARATH DUF724 domain-containing protein 2; TrEMBL-Plants: tr|K7LB84|K7LB84_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0284100 | 13 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
mobidb-lite | MobiDBLite | 1 | 1.52 |