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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2236930 |
| Transcript ID | Lj3g3v2236930.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pleiotropic drug resistance protein 1-like [Cicer arietinum] gi|502147693|ref|XP_004506879.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 48 | 48 | 0 | – | |
| Phobius | 1 | 42 | 42 | – | – | |
| PANTHER | 1 | 48 | 48 | 0 | – | |
| Pfam | 17 | 80 | 64 | 3.20E-26 | ||
| TMHMM | 43 | 65 | 23 | – | – | |
| Phobius | 43 | 70 | 28 | – | – | |
| Phobius | 71 | 475 | 405 | – | – | |
| MobiDBLite | 81 | 115 | 35 | – | – | |
| PANTHER | 117 | 728 | 612 | 0 | – | |
| PANTHER | 117 | 728 | 612 | 0 | – | |
| CDD | 127 | 365 | 239 | 3.85E-103 | ||
| ProSiteProfiles | 130 | 382 | 253 | 14.413 | ||
| SUPERFAMILY | 149 | 366 | 218 | 2.79E-37 | ||
| Gene3D | 154 | 366 | 213 | 8.80E-42 | ||
| Pfam | 158 | 310 | 153 | 5.40E-20 | ||
| SMART | 167 | 359 | 193 | 2.00E-10 | ||
| Pfam | 456 | 669 | 214 | 4.70E-59 | ||
| TMHMM | 474 | 493 | 20 | – | – | |
| Phobius | 476 | 494 | 19 | – | – | |
| Phobius | 495 | 505 | 11 | – | – | |
| TMHMM | 506 | 523 | 18 | – | – | |
| Phobius | 506 | 522 | 17 | – | – | |
| Phobius | 523 | 553 | 31 | – | – | |
| Phobius | 554 | 577 | 24 | – | – | |
| TMHMM | 554 | 576 | 23 | – | – | |
| Phobius | 578 | 588 | 11 | – | – | |
| Phobius | 589 | 607 | 19 | – | – | |
| TMHMM | 589 | 608 | 20 | – | – | |
| Phobius | 608 | 618 | 11 | – | – | |
| TMHMM | 618 | 640 | 23 | – | – | |
| Phobius | 619 | 639 | 21 | – | – | |
| Phobius | 640 | 650 | 11 | – | – | |
| TMHMM | 647 | 669 | 23 | – | – | |
| Phobius | 651 | 670 | 20 | – | – | |
| Phobius | 671 | 696 | 26 | – | – | |
| Phobius | 697 | 723 | 27 | – | – | |
| TMHMM | 698 | 720 | 23 | – | – | |
| Phobius | 724 | 728 | 5 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of Lj3g3v2236930.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2236930.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.