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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2247180 |
| Transcript ID | Lj3g3v2247180.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: N-alpha-acetyltransferase 16, NatA auxiliary subunit-like [Glycine max] gi|356526163|ref|XP_003531689.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 13 | 13 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 31 | 31 | – | – | |
| Phobius | 14 | 22 | 9 | – | – | |
| Phobius | 23 | 31 | 9 | – | – | |
| Phobius | 32 | 981 | 950 | – | – | |
| PANTHER | 74 | 960 | 887 | 0 | – | |
| PANTHER | 74 | 960 | 887 | 0 | – | |
| PIRSF | 78 | 898 | 821 | 0 | ||
| Gene3D | 85 | 355 | 271 | 3.20E-27 | ||
| ProSiteProfiles | 89 | 224 | 136 | 16.739 | ||
| SUPERFAMILY | 99 | 256 | 158 | 4.78E-19 | ||
| ProSiteProfiles | 157 | 190 | 34 | 11.771 | ||
| SMART | 157 | 190 | 34 | 2.80E-05 | ||
| Pfam | 164 | 203 | 40 | 2.40E-07 | ||
| ProSiteProfiles | 191 | 224 | 34 | 5.723 | ||
| Pfam | 267 | 776 | 510 | 7.60E-199 | ||
| Coils | 275 | 309 | 35 | – | – | |
| SUPERFAMILY | 301 | 339 | 39 | 4.78E-19 | ||
| ProSiteProfiles | 303 | 336 | 34 | 6.7 | ||
| ProSiteProfiles | 303 | 336 | 34 | 5.93 | ||
| ProSiteProfiles | 460 | 527 | 68 | 10.069 | ||
| ProSiteProfiles | 460 | 493 | 34 | 7.523 | ||
| SMART | 460 | 493 | 34 | 1.5 | ||
| Gene3D | 460 | 523 | 64 | 7.40E-09 | ||
| SUPERFAMILY | 463 | 520 | 58 | 4.78E-19 | ||
| MobiDBLite | 657 | 726 | 70 | – | – | |
| Coils | 676 | 696 | 21 | – | – | |
| Gene3D | 747 | 796 | 50 | 7.40E-09 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj3g3v2247180.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2247180.1, powered by CORGI.
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