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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2442070 |
| Transcript ID | Lj3g3v2442070.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Glycine max] gi|356544283|ref|XP_003540583.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 38 | 38 | – | – | |
| SignalP | 1 | 32 | 32 | – | – | |
| Phobius | 1 | 7 | 7 | – | – | |
| Phobius | 1 | 36 | 36 | – | – | |
| PANTHER | 6 | 167 | 162 | 2.40E-237 | – | |
| PANTHER | 6 | 167 | 162 | 2.40E-237 | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 8 | 27 | 20 | – | – | |
| Phobius | 28 | 36 | 9 | – | – | |
| Pfam | 34 | 74 | 41 | 8.30E-10 | ||
| Gene3D | 35 | 337 | 303 | 3.00E-66 | ||
| Phobius | 37 | 600 | 564 | – | – | |
| SUPERFAMILY | 76 | 272 | 197 | 9.02E-32 | – | |
| SMART | 125 | 148 | 24 | 190 | ||
| SMART | 149 | 173 | 25 | 34 | ||
| PANTHER | 184 | 569 | 386 | 2.40E-237 | – | |
| PANTHER | 184 | 569 | 386 | 2.40E-237 | – | |
| SUPERFAMILY | 247 | 558 | 312 | 1.65E-60 | – | |
| SMART | 278 | 302 | 25 | 190 | ||
| Gene3D | 338 | 571 | 234 | 7.20E-64 | ||
| SMART | 398 | 422 | 25 | 6.3 | ||
| Pfam | 400 | 459 | 60 | 2.80E-08 | ||
| PRINTS | 401 | 414 | 14 | 2.10E-05 | – | |
| SMART | 446 | 470 | 25 | 24 | ||
| PRINTS | 446 | 459 | 14 | 2.10E-05 | – | |
| SMART | 518 | 541 | 24 | 220 | ||
| SMART | 542 | 567 | 26 | 100 | ||
| TMHMM | 600 | 617 | 18 | – | – | |
| Phobius | 601 | 617 | 17 | – | – | |
| Phobius | 618 | 618 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj3g3v2442070.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2442070.1, powered by CORGI.
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