Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj3g3v2634540.1

Overview

Field Value
Gene ID Lj3g3v2634540
Transcript ID Lj3g3v2634540.1
Lotus japonicus genome version MG20 v3.0
Description Developmentally regulated G-protein 1 isoform 1 [Theobroma cacao] gi|508779961|gb|EOY27217.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11702
1 392 392 2.80E-264 –
PANTHER
PTHR11702:SF26
1 392 392 2.80E-264 –
ProSiteProfiles
PS51710
63 288 226 48.9
IPR031167
TIGRFAM
TIGR00231
64 210 147 5.00E-20
IPR005225
CDD
cd01896
64 295 232 7.85E-154 –
SUPERFAMILY
SSF52540
64 303 240 4.56E-55
IPR027417
Gene3D
G3DSA:3.40.50.300
64 172 109 2.30E-43
IPR027417
Pfam
PF01926
64 178 115 5.00E-20
IPR006073
PRINTS
PR00326
65 85 21 1.20E-29
IPR006073
PRINTS
PR00326
86 104 19 1.20E-29
IPR006073
PRINTS
PR00326
113 128 16 1.20E-29
IPR006073
ProSitePatterns
PS00905
115 128 14 –
IPR006074
PRINTS
PR00326
130 148 19 1.20E-29
IPR006073
Pfam
PF16897
184 289 106 1.20E-44
IPR031662
Gene3D
G3DSA:3.40.50.300
239 305 67 2.30E-43
IPR027417
SUPERFAMILY
SSF81271
284 366 83 2.88E-14
IPR012676
CDD
cd01666
289 366 78 1.94E-40 –
Pfam
PF02824
290 366 77 3.30E-23
IPR004095
MobiDBLite
mobidb-lite
368 399 32 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005525
Molecular function GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
Subterm of

Genome browser

LORE1 insertions 23

Expression data

Expression pattern

Expression pattern of Lj3g3v2634540.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v2634540.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.