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Lj3g3v3031030.1

Overview

Field Value
Gene ID Lj3g3v3031030
Transcript ID Lj3g3v3031030.1
Lotus japonicus genome version MG20 v3.0
Description Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain isoform 3 [Theobroma cacao] gi|508716123|gb|EOY08020.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24098:SF5
2 75 74 5.00E-149 –
PANTHER
PTHR24098
2 75 74 5.00E-149 –
SUPERFAMILY
SSF57903
10 69 60 6.58E-13
IPR011011
Gene3D
G3DSA:3.30.40.10
20 74 55 4.80E-14
IPR013083
ProSiteProfiles
PS50016
23 70 48 10.282
IPR019787
SMART
SM00249
25 68 44 4.80E-10
IPR001965
ProSitePatterns
PS01359
26 67 42 –
IPR019786
ProSitePatterns
PS01359
64 148 85 –
IPR019786
Gene3D
G3DSA:3.30.40.10
86 148 63 3.00E-08
IPR013083
SUPERFAMILY
SSF57903
87 146 60 2.19E-08
IPR011011
PANTHER
PTHR24098:SF5
92 377 286 5.00E-149 –
SMART
SM00249
92 149 58 0.0033
IPR001965
PANTHER
PTHR24098
92 377 286 5.00E-149 –
ProSiteProfiles
PS51186
198 361 164 9.975
IPR000182
SUPERFAMILY
SSF55729
220 340 121 2.09E-09
IPR016181
Gene3D
G3DSA:3.40.630.30
248 358 111 1.40E-08
IPR016181

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008080
Molecular function N-acetyltransferase activity Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule.
Subterm of

Genome browser

LORE1 insertions 4

Expression data

Expression pattern

Expression pattern of Lj3g3v3031030.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v3031030.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.