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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3032100 |
| Transcript ID | Lj3g3v3032100.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: leucine--tRNA ligase, cytoplasmic-like isoform X1 [Cicer arietinum] gi|502147203|ref|XP_004506691.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 28 | 131 | 104 | 0 | – | |
| PANTHER | 28 | 131 | 104 | 0 | – | |
| Gene3D | 43 | 136 | 94 | 4.00E-99 | ||
| SUPERFAMILY | 43 | 132 | 90 | 1.46E-94 | – | |
| TIGRFAM | 45 | 1081 | 1037 | 9.70E-271 | ||
| Pfam | 50 | 132 | 83 | 2.70E-07 | ||
| ProSitePatterns | 82 | 93 | 12 | – | ||
| MobiDBLite | 142 | 178 | 37 | – | – | |
| Gene3D | 185 | 290 | 106 | 4.00E-99 | ||
| PANTHER | 195 | 343 | 149 | 0 | – | |
| PANTHER | 195 | 343 | 149 | 0 | – | |
| SUPERFAMILY | 205 | 286 | 82 | 1.46E-94 | – | |
| Pfam | 216 | 782 | 567 | 8.70E-32 | ||
| Gene3D | 306 | 557 | 252 | 2.50E-45 | ||
| SUPERFAMILY | 310 | 438 | 129 | 5.32E-29 | ||
| PANTHER | 371 | 473 | 103 | 0 | – | |
| PANTHER | 371 | 473 | 103 | 0 | – | |
| Coils | 478 | 498 | 21 | – | – | |
| SUPERFAMILY | 505 | 544 | 40 | 5.32E-29 | ||
| PANTHER | 515 | 1065 | 551 | 0 | – | |
| PANTHER | 515 | 1065 | 551 | 0 | – | |
| SUPERFAMILY | 544 | 789 | 246 | 1.46E-94 | – | |
| CDD | 557 | 785 | 229 | 2.63E-66 | – | |
| Gene3D | 558 | 773 | 216 | 4.00E-99 | ||
| Gene3D | 774 | 920 | 147 | 1.40E-17 | ||
| CDD | 783 | 903 | 121 | 2.29E-40 | – | |
| SUPERFAMILY | 816 | 952 | 137 | 7.85E-20 | ||
| Pfam | 822 | 944 | 123 | 1.90E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Aminoacyl-tRNA editing activity | The hydrolysis of an incorrectly aminoacylated tRNA. | ||
| Molecular function | Aminoacyl-tRNA ligase activity | Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP. | ||
| Molecular function | Leucine-tRNA ligase activity | Catalysis of the reaction: L-leucine + ATP + tRNA(Leu) = AMP + diphosphate + 2 H(+) + Leu-tRNA(Leu). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | TRNA aminoacylation for protein translation | The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA and the alpha carboxylic acid group of an amino acid, to be used in ribosome-mediated polypeptide synthesis. | ||
| Biological process | Leucyl-tRNA aminoacylation | The process of coupling leucine to leucyl-tRNA, catalyzed by leucyl-tRNA synthetase. The leucyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a leucine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification. |
Expression pattern of Lj3g3v3032100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3032100.1, powered by CORGI.
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