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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0620010 |
| Transcript ID | Lj4g3v0620010.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable receptor-like protein kinase At1g49730-like [Cicer arietinum] gi|502143150|ref|XP_004505235.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 7 | 7 | – | – | |
| SignalP | 1 | 26 | 26 | – | – | |
| Phobius | 1 | 27 | 27 | – | – | |
| Phobius | 8 | 19 | 12 | – | – | |
| TMHMM | 10 | 32 | 23 | – | – | |
| Phobius | 20 | 27 | 8 | – | – | |
| Phobius | 28 | 252 | 225 | – | – | |
| Gene3D | 184 | 339 | 156 | 5.60E-12 | ||
| PANTHER | 231 | 663 | 433 | 9.20E-236 | – | |
| PANTHER | 231 | 663 | 433 | 9.20E-236 | – | |
| Phobius | 253 | 276 | 24 | – | – | |
| TMHMM | 253 | 275 | 23 | – | – | |
| Phobius | 277 | 674 | 398 | – | – | |
| SUPERFAMILY | 307 | 596 | 290 | 4.86E-80 | ||
| ProSiteProfiles | 326 | 605 | 280 | 37.997 | ||
| SMART | 326 | 601 | 276 | 2.50E-37 | ||
| Pfam | 330 | 592 | 263 | 2.20E-49 | ||
| CDD | 332 | 594 | 263 | 3.78E-99 | – | |
| ProSitePatterns | 332 | 354 | 23 | – | ||
| Gene3D | 340 | 387 | 48 | 1.20E-26 | – | |
| Gene3D | 388 | 594 | 207 | 1.80E-44 | – | |
| ProSitePatterns | 446 | 458 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj4g3v0620010.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0620010.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.