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Lj4g3v0912440.1

Overview

Field Value
Gene ID Lj4g3v0912440
Transcript ID Lj4g3v0912440.1
Lotus japonicus genome version MG20 v3.0
Description
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
NON_CYTOPLASMIC_DOMAIN
1 232 232 – –
PANTHER
PTHR27001:SF170
21 44 24 1.80E-163 –
PANTHER
PTHR27001
21 44 24 1.80E-163 –
Pfam
PF01476
47 84 38 0.055
IPR018392
Gene3D
G3DSA:3.10.350.10
47 85 39 7.90E-04
IPR018392
PANTHER
PTHR27001:SF170
205 575 371 1.80E-163 –
PANTHER
PTHR27001
205 575 371 1.80E-163 –
Phobius
TRANSMEMBRANE
233 260 28 – –
TMHMM
TMhelix
233 255 23 – –
Phobius
CYTOPLASMIC_DOMAIN
261 576 316 – –
ProSiteProfiles
PS50011
275 545 271 22.633
IPR000719
SUPERFAMILY
SSF56112
291 549 259 1.28E-48
IPR011009
Gene3D
G3DSA:3.30.200.20
316 377 62 4.20E-12 –
Pfam
PF07714
330 448 119 1.80E-23
IPR001245
Gene3D
G3DSA:1.10.510.10
378 550 173 5.00E-23 –
ProSitePatterns
PS00109
419 431 13 –
IPR008266

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj4g3v0912440.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v0912440.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.