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Lj4g3v1893210.1

Overview

Field Value
Gene ID Lj4g3v1893210
Transcript ID Lj4g3v1893210.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 3-like [Cicer arietinum] gi|502151452|ref|XP_004508448.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 26 26
Phobius 1 2 2
SignalP 1 19 19
Phobius 3 14 12
Phobius 15 26 12
Phobius 27 120 94
PANTHER 97 162 66 1.90E-272
PANTHER 97 162 66 1.90E-272
Phobius 121 141 21
Gene3D 130 150 21 1.00E-25
Phobius 142 504 363
PANTHER 178 504 327 1.90E-272
PANTHER 178 504 327 1.90E-272
Gene3D 193 280 88 1.00E-25
SUPERFAMILY 200 493 294 1.09E-75
ProSiteProfiles 218 492 275 38.661
SMART 218 492 275 8.80E-36
Pfam 223 490 268 4.10E-50
CDD 224 490 267 1.16E-97
ProSitePatterns 224 246 23
Gene3D 281 497 217 3.70E-43
ProSitePatterns 339 351 13

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of Lj4g3v1893210.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v1893210.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.