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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2373740 |
| Transcript ID | Lj4g3v2373740.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At5g14770, mitochondrial-like [Cicer arietinum] gi|502142591|ref|XP_004505033.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 10 | 10 | – | – | |
| Phobius | 1 | 30 | 30 | – | – | |
| SignalP | 1 | 14 | 14 | – | – | |
| Phobius | 11 | 22 | 12 | – | – | |
| PANTHER | 14 | 76 | 63 | 1.00E-282 | – | |
| PANTHER | 14 | 76 | 63 | 1.00E-282 | – | |
| Phobius | 23 | 30 | 8 | – | – | |
| Phobius | 31 | 1032 | 1002 | – | – | |
| ProSiteProfiles | 63 | 97 | 35 | 6.697 | ||
| ProSiteProfiles | 98 | 132 | 35 | 8.944 | ||
| Pfam | 102 | 130 | 29 | 1.3 | ||
| ProSiteProfiles | 133 | 158 | 26 | 5.557 | ||
| Pfam | 136 | 157 | 22 | 0.41 | ||
| ProSiteProfiles | 163 | 197 | 35 | 11.148 | ||
| Pfam | 163 | 211 | 49 | 4.70E-14 | ||
| TIGRFAM | 165 | 198 | 34 | 6.60E-05 | ||
| PANTHER | 177 | 296 | 120 | 1.00E-282 | – | |
| PANTHER | 177 | 296 | 120 | 1.00E-282 | – | |
| ProSiteProfiles | 198 | 232 | 35 | 9.394 | ||
| ProSiteProfiles | 233 | 267 | 35 | 10.402 | ||
| Pfam | 233 | 281 | 49 | 4.00E-12 | ||
| TIGRFAM | 238 | 269 | 32 | 1.70E-04 | ||
| ProSiteProfiles | 268 | 298 | 31 | 10.468 | ||
| Gene3D | 268 | 594 | 327 | 2.90E-08 | ||
| TIGRFAM | 270 | 295 | 26 | 3.20E-06 | ||
| SUPERFAMILY | 316 | 468 | 153 | 2.28E-05 | ||
| PANTHER | 322 | 392 | 71 | 1.00E-282 | – | |
| PANTHER | 322 | 392 | 71 | 1.00E-282 | – | |
| ProSiteProfiles | 324 | 358 | 35 | 11.027 | ||
| TIGRFAM | 327 | 360 | 34 | 2.30E-06 | ||
| Pfam | 327 | 356 | 30 | 2.70E-05 | ||
| Pfam | 358 | 407 | 50 | 2.40E-13 | ||
| ProSiteProfiles | 359 | 393 | 35 | 12.452 | ||
| TIGRFAM | 361 | 394 | 34 | 3.40E-07 | ||
| ProSiteProfiles | 394 | 428 | 35 | 9.821 | ||
| TIGRFAM | 396 | 429 | 34 | 2.00E-05 | ||
| Pfam | 429 | 477 | 49 | 4.00E-12 | ||
| ProSiteProfiles | 429 | 463 | 35 | 10.457 | ||
| TIGRFAM | 431 | 465 | 35 | 2.80E-06 | ||
| SUPERFAMILY | 437 | 641 | 205 | 1.73E-05 | – | |
| PANTHER | 463 | 554 | 92 | 1.00E-282 | – | |
| PANTHER | 463 | 554 | 92 | 1.00E-282 | – | |
| ProSiteProfiles | 464 | 498 | 35 | 12.759 | ||
| TIGRFAM | 466 | 500 | 35 | 9.50E-10 | ||
| Pfam | 498 | 546 | 49 | 1.20E-13 | ||
| ProSiteProfiles | 499 | 533 | 35 | 12.123 | ||
| TIGRFAM | 501 | 534 | 34 | 5.60E-07 | ||
| ProSiteProfiles | 534 | 568 | 35 | 10.567 | ||
| TIGRFAM | 537 | 566 | 30 | 4.90E-04 | ||
| ProSiteProfiles | 569 | 603 | 35 | 11.477 | ||
| TIGRFAM | 571 | 605 | 35 | 4.30E-07 | ||
| Pfam | 591 | 648 | 58 | 4.90E-13 | ||
| ProSiteProfiles | 604 | 638 | 35 | 9.657 | ||
| TIGRFAM | 608 | 639 | 32 | 2.80E-04 | ||
| SUPERFAMILY | 608 | 697 | 90 | 2.28E-05 | ||
| ProSiteProfiles | 639 | 672 | 34 | 9.427 | ||
| PANTHER | 672 | 737 | 66 | 1.00E-282 | – | |
| PANTHER | 672 | 737 | 66 | 1.00E-282 | – | |
| Pfam | 672 | 718 | 47 | 9.90E-17 | ||
| ProSiteProfiles | 673 | 707 | 35 | 13.154 | ||
| TIGRFAM | 675 | 709 | 35 | 2.60E-09 | ||
| ProSiteProfiles | 708 | 742 | 35 | 10.764 | ||
| TIGRFAM | 710 | 743 | 34 | 9.60E-06 | ||
| ProSiteProfiles | 743 | 777 | 35 | 6.939 | ||
| PANTHER | 773 | 959 | 187 | 1.00E-282 | – | |
| PANTHER | 773 | 959 | 187 | 1.00E-282 | – | |
| ProSiteProfiles | 778 | 812 | 35 | 10.687 | ||
| Pfam | 779 | 826 | 48 | 1.50E-11 | ||
| TIGRFAM | 781 | 813 | 33 | 4.50E-06 | ||
| ProSiteProfiles | 813 | 847 | 35 | 12.606 | ||
| TIGRFAM | 815 | 849 | 35 | 1.50E-08 | ||
| Pfam | 847 | 894 | 48 | 2.20E-16 | ||
| ProSiteProfiles | 848 | 882 | 35 | 12.781 | ||
| TIGRFAM | 851 | 884 | 34 | 1.50E-07 | ||
| ProSiteProfiles | 883 | 917 | 35 | 11.783 | ||
| TIGRFAM | 886 | 918 | 33 | 6.30E-07 | ||
| Pfam | 917 | 966 | 50 | 9.50E-13 | ||
| ProSiteProfiles | 918 | 952 | 35 | 11.97 | ||
| TIGRFAM | 921 | 953 | 33 | 4.70E-06 | ||
| ProSiteProfiles | 965 | 999 | 35 | 5.426 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v2373740.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2373740.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.