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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2845100 |
| Transcript ID | Lj4g3v2845100.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: CBS domain-containing protein CBSCBSPB3-like [Cicer arietinum] gi|502139757|ref|XP_004503889.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 297 | 297 | – | – | |
| PANTHER | 1 | 168 | 168 | 2.80E-165 | – | |
| PANTHER | 1 | 168 | 168 | 2.80E-165 | – | |
| Gene3D | 8 | 126 | 119 | 2.80E-22 | – | |
| ProSiteProfiles | 12 | 71 | 60 | 9.308 | ||
| CDD | 14 | 128 | 115 | 3.11E-49 | – | |
| SMART | 15 | 64 | 50 | 0.3 | ||
| SUPERFAMILY | 17 | 129 | 113 | 2.65E-21 | – | |
| Pfam | 75 | 115 | 41 | 2.60E-06 | ||
| ProSiteProfiles | 79 | 135 | 57 | 10.565 | ||
| SMART | 82 | 130 | 49 | 0.55 | ||
| MobiDBLite | 160 | 181 | 22 | – | – | |
| SUPERFAMILY | 180 | 275 | 96 | 1.70E-17 | – | |
| Gene3D | 188 | 270 | 83 | 1.10E-16 | – | |
| ProSiteProfiles | 188 | 273 | 86 | 19.444 | ||
| SMART | 190 | 273 | 84 | 1.80E-11 | ||
| Pfam | 191 | 271 | 81 | 1.40E-11 | ||
| PANTHER | 207 | 323 | 117 | 2.80E-165 | – | |
| PANTHER | 207 | 323 | 117 | 2.80E-165 | – | |
| TMHMM | 296 | 318 | 23 | – | – | |
| Phobius | 298 | 318 | 21 | – | – | |
| Phobius | 319 | 323 | 5 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v2845100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2845100.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.