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Lj4g3v3004140.1

Overview

Field Value
Gene ID Lj4g3v3004140
Transcript ID Lj4g3v3004140.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: dynamin-related protein 5A-like [Cicer arietinum] gi|502139021|ref|XP_004503616.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11566:SF58
1 594 594 0 –
SMART
SM00053
1 252 252 2.20E-115
IPR001401
Gene3D
G3DSA:3.40.50.300
1 310 310 2.30E-128
IPR027417
PANTHER
PTHR11566
1 594 594 0
IPR022812
SUPERFAMILY
SSF52540
30 309 280 1.79E-71
IPR027417
ProSiteProfiles
PS51718
32 301 270 57.935
IPR030381
CDD
cd08771
34 301 268 1.35E-128 –
PRINTS
PR00195
35 53 19 1.10E-60
IPR022812
Pfam
PF00350
38 214 177 2.30E-54
IPR022812
PRINTS
PR00195
60 77 18 1.10E-60
IPR022812
ProSitePatterns
PS00410
61 70 10 –
IPR019762
PRINTS
PR00195
133 150 18 1.10E-60
IPR022812
PRINTS
PR00195
183 201 19 1.10E-60
IPR022812
PRINTS
PR00195
202 218 17 1.10E-60
IPR022812
Pfam
PF01031
223 490 268 1.20E-66
IPR000375
PRINTS
PR00195
225 244 20 1.10E-60
IPR022812
SMART
SM00302
514 594 81 1.10E-21
IPR003130
Pfam
PF02212
515 594 80 6.80E-17
IPR003130
ProSiteProfiles
PS51388
519 594 76 16.695
IPR020850

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003924
Molecular function GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
Subterm of
GO:0005525
Molecular function GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
Subterm of

Genome browser

LORE1 insertions 18

Expression data

Expression pattern

Expression pattern of Lj4g3v3004140.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v3004140.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.