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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0540170 |
| Transcript ID | Lj5g3v0540170.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Pleiotropic drug resistance protein 4 [Triticum urartu] gi|474420790|gb|EMS67534.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 48 | 48 | 0 | – | |
| PANTHER | 1 | 48 | 48 | 0 | – | |
| Phobius | 1 | 42 | 42 | – | – | |
| Pfam | 17 | 78 | 62 | 4.70E-26 | ||
| TMHMM | 42 | 64 | 23 | – | – | |
| Phobius | 43 | 67 | 25 | – | – | |
| Phobius | 68 | 485 | 418 | – | – | |
| PANTHER | 127 | 624 | 498 | 0 | – | |
| PANTHER | 127 | 624 | 498 | 0 | – | |
| CDD | 137 | 361 | 225 | 4.16E-95 | ||
| ProSiteProfiles | 140 | 391 | 252 | 13.392 | ||
| SUPERFAMILY | 156 | 353 | 198 | 1.15E-35 | ||
| Gene3D | 163 | 357 | 195 | 1.40E-39 | ||
| Pfam | 168 | 320 | 153 | 1.70E-19 | ||
| SMART | 177 | 370 | 194 | 7.20E-10 | ||
| Pfam | 399 | 565 | 167 | 5.10E-44 | ||
| TMHMM | 462 | 481 | 20 | – | – | |
| Phobius | 486 | 510 | 25 | – | – | |
| TMHMM | 488 | 510 | 23 | – | – | |
| Phobius | 511 | 515 | 5 | – | – | |
| TMHMM | 516 | 538 | 23 | – | – | |
| Phobius | 516 | 535 | 20 | – | – | |
| Phobius | 536 | 546 | 11 | – | – | |
| TMHMM | 545 | 567 | 23 | – | – | |
| Phobius | 547 | 566 | 20 | – | – | |
| Phobius | 567 | 593 | 27 | – | – | |
| TMHMM | 594 | 616 | 23 | – | – | |
| Phobius | 594 | 616 | 23 | – | – | |
| Phobius | 617 | 624 | 8 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of Lj5g3v0540170.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0540170.1, powered by CORGI.
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