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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0769550 |
| Transcript ID | Lj5g3v0769550.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: germin-like protein subfamily 3 member 2-like [Glycine max] gi|356546081|ref|XP_003541460.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| Phobius | 1 | 23 | 23 | – | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| PANTHER | 4 | 218 | 215 | 3.30E-137 | – | |
| PANTHER | 4 | 218 | 215 | 3.30E-137 | – | |
| Phobius | 6 | 16 | 11 | – | – | |
| Phobius | 17 | 23 | 7 | – | – | |
| Phobius | 24 | 218 | 195 | – | – | |
| Gene3D | 24 | 214 | 191 | 6.50E-58 | ||
| SUPERFAMILY | 25 | 214 | 190 | 1.66E-41 | ||
| SMART | 61 | 206 | 146 | 1.00E-47 | ||
| Pfam | 69 | 204 | 136 | 2.40E-42 | ||
| ProSitePatterns | 103 | 116 | 14 | – | ||
| PRINTS | 108 | 128 | 21 | 9.10E-24 | ||
| PRINTS | 138 | 158 | 21 | 9.10E-24 | ||
| PRINTS | 171 | 186 | 16 | 9.10E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Manganese ion binding | Interacting selectively and non-covalently with manganese (Mn) ions. | ||
| Molecular function | Nutrient reservoir activity | Functions in the storage of nutritious substrates. |
Expression pattern of Lj5g3v0769550.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0769550.1, powered by CORGI.
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