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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1808060 |
| Transcript ID | Lj5g3v1808060.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter G family member 24-like [Glycine max] gi|356574615|ref|XP_003555441.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 29 | 29 | – | – | |
| Phobius | 1 | 11 | 11 | – | – | |
| Phobius | 1 | 29 | 29 | – | – | |
| PANTHER | 4 | 785 | 782 | 0 | – | |
| PANTHER | 4 | 785 | 782 | 0 | – | |
| TMHMM | 12 | 29 | 18 | – | – | |
| Phobius | 12 | 24 | 13 | – | – | |
| Phobius | 25 | 29 | 5 | – | – | |
| Phobius | 30 | 291 | 262 | – | – | |
| Phobius | 292 | 314 | 23 | – | – | |
| Phobius | 315 | 887 | 573 | – | – | |
| CDD | 508 | 734 | 227 | 3.47E-86 | – | |
| Gene3D | 508 | 738 | 231 | 1.20E-47 | ||
| SUPERFAMILY | 510 | 740 | 231 | 2.45E-44 | ||
| ProSiteProfiles | 510 | 751 | 242 | 17.907 | ||
| Pfam | 527 | 679 | 153 | 3.20E-25 | ||
| SMART | 536 | 728 | 193 | 7.00E-14 | ||
| ProSitePatterns | 651 | 665 | 15 | – | ||
| PANTHER | 818 | 1117 | 300 | 0 | – | |
| PANTHER | 818 | 1117 | 300 | 0 | – | |
| TMHMM | 886 | 905 | 20 | – | – | |
| Phobius | 888 | 905 | 18 | – | – | |
| Phobius | 906 | 910 | 5 | – | – | |
| Phobius | 911 | 932 | 22 | – | – | |
| TMHMM | 912 | 934 | 23 | – | – | |
| Phobius | 933 | 992 | 60 | – | – | |
| TMHMM | 963 | 985 | 23 | – | – | |
| TMHMM | 992 | 1014 | 23 | – | – | |
| Phobius | 993 | 1013 | 21 | – | – | |
| Phobius | 1014 | 1018 | 5 | – | – | |
| TMHMM | 1018 | 1035 | 18 | – | – | |
| Phobius | 1019 | 1035 | 17 | – | – | |
| Phobius | 1036 | 1091 | 56 | – | – | |
| Phobius | 1092 | 1114 | 23 | – | – | |
| TMHMM | 1093 | 1115 | 23 | – | – | |
| Phobius | 1115 | 1117 | 3 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of Lj5g3v1808060.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1808060.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.