Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj5g3v2044980.1

Overview

Field Value
Gene ID Lj5g3v2044980
Transcript ID Lj5g3v2044980.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: LRR receptor-like serine/threonine-protein kinase ERL2-like [Cicer arietinum] gi|502119538|ref|XP_004496653.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 935 935 0
Phobius 1 21 21
PANTHER 1 935 935 0
Phobius 22 41 20
TMHMM 22 44 23
Phobius 42 602 561
Gene3D 45 328 284 1.70E-61
SUPERFAMILY 45 345 301 5.39E-50
Pfam 46 85 40 4.00E-09
SUPERFAMILY 334 582 249 7.94E-45
Gene3D 335 582 248 2.80E-57
TMHMM 602 624 23
Phobius 603 624 22
Gene3D 613 745 133 1.30E-17
Phobius 625 999 375
SUPERFAMILY 646 935 290 1.07E-73
ProSiteProfiles 668 939 272 35.001
SMART 668 936 269 6.40E-22
Pfam 671 932 262 8.30E-42
ProSitePatterns 674 696 23
Gene3D 748 977 230 2.20E-44
ProSitePatterns 790 802 13

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of Lj5g3v2044980.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v2044980.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.