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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0029980 |
| Transcript ID | Lj6g3v0029980.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: cryptochrome-2-like isoform X1 [Cicer arietinum] gi|502122637|ref|XP_004497843.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 513 | 513 | 4.00E-285 | – | |
| PANTHER | 1 | 513 | 513 | 4.00E-285 | – | |
| ProSiteProfiles | 5 | 134 | 130 | 34.654 | ||
| Gene3D | 5 | 148 | 144 | 2.30E-43 | ||
| TIGRFAM | 6 | 482 | 477 | 3.10E-261 | ||
| SUPERFAMILY | 7 | 176 | 170 | 6.93E-49 | ||
| Pfam | 7 | 161 | 155 | 5.80E-37 | ||
| Gene3D | 149 | 171 | 23 | 1.00E-32 | – | |
| SUPERFAMILY | 194 | 487 | 294 | 1.26E-97 | ||
| Gene3D | 206 | 292 | 87 | 1.00E-32 | – | |
| Pfam | 284 | 478 | 195 | 4.80E-61 | ||
| Gene3D | 293 | 484 | 192 | 7.90E-64 | – | |
| PRINTS | 333 | 349 | 17 | 7.80E-10 | ||
| ProSitePatterns | 333 | 345 | 13 | – | ||
| PRINTS | 353 | 371 | 19 | 7.80E-10 | ||
| MobiDBLite | 490 | 607 | 118 | – | – | |
| Coils | 551 | 571 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Blue light signaling pathway | The series of molecular signals initiated upon sensing of blue light by photoreceptor molecule, at a wavelength between 400nm and 470nm. | ||
| Molecular function | Blue light photoreceptor activity | The function of absorbing and responding to electromagnetic radiation with a wavelength of approximately 400-470nm. The response may involve a change in conformation. |
Expression pattern of Lj6g3v0029980.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0029980.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.