Domain Predictions — View

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PR00147

Source: PRINTS

Description

DNA photolyase signature

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 14

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0011479.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cryptochrome [Medicago truncatula] gi\|357489649\|ref\|XP_003615112.1\|	Domains G3DSA:1.10.579.10 G3DSA:1.25.40.80 G3DSA:3.40.50.620 IPR002081 IPR005101 IPR006050 IPR014134 IPR014729 IPR018394 PF00875 PF03441 PR00147 PS00394 PS51645 PTHR11455 PTHR11455:SF24 SSF48173 SSF52425 TIGR02766	19
Lj0g3v0286829.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cryptochrome-1-like [Glycine max] gi\|359806517\|ref\|NP_001241002.1\|	Domains Coil G3DSA:1.10.579.10 G3DSA:1.25.40.80 G3DSA:3.40.50.620 IPR002081 IPR005101 IPR006050 IPR014134 IPR014729 IPR018394 IPR020978 PF00875 PF03441 PF12546 PR00147 PS00394 PS00691 PS51645 PTHR11455 PTHR11455:SF24 SSF48173 SSF52425 TIGR02766 mobidb-lite	24
Lj5g3v1203330.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: cryptochrome-2-like [Glycine max] gi\|356576533\|ref\|XP_003556385.1\|	Domains G3DSA:1.10.579.10 G3DSA:1.25.40.80 G3DSA:3.40.50.620 IPR002081 IPR005101 IPR006050 IPR014134 IPR014729 IPR018394 PF00875 PF03441 PR00147 PS00394 PS00691 PS51645 PTHR11455 PTHR11455:SF24 SSF48173 SSF52425 TIGR02766 mobidb-lite	21
Lj6g3v0029980.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: cryptochrome-2-like isoform X1 [Cicer arietinum] gi\|502122637\|ref\|XP_004497843.1\|	Domains Coil G3DSA:1.10.579.10 G3DSA:1.25.40.80 G3DSA:3.40.50.620 IPR002081 IPR005101 IPR006050 IPR014134 IPR014729 IPR018394 PF00875 PF03441 PR00147 PS00394 PS51645 PTHR11455 PTHR11455:SF24 SSF48173 SSF52425 TIGR02766 mobidb-lite	21
Lj6g3v0029980.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: cryptochrome-2-like isoform X1 [Cicer arietinum] gi\|502122637\|ref\|XP_004497843.1\|	Domains Coil G3DSA:1.10.579.10 G3DSA:1.25.40.80 G3DSA:3.40.50.620 IPR002081 IPR005101 IPR006050 IPR014134 IPR014729 IPR018394 PF00875 PF03441 PR00147 PS00394 PS51645 PTHR11455 PTHR11455:SF24 SSF48173 SSF52425 TIGR02766 mobidb-lite	21
LotjaGi1g1v0145900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cryptochrome 1; TAIR: AT4G08920.1 cryptochrome 1; Swiss-Prot: sp\|Q43125\|CRY1_ARATH Cryptochrome-1; TrEMBL-Plants: tr\|A0A0L9UYT7\|A0A0L9UYT7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0145900	Domains G3DSA:1.10.579.10 G3DSA:1.25.40.80 G3DSA:3.40.50.620 IPR002081 IPR005101 IPR006050 IPR014134 IPR014729 IPR018394 IPR020978 IPR036134 IPR036155 PF00875 PF03441 PF12546 PR00147 PS00394 PS00691 PS51645 PTHR11455 PTHR11455:SF50 SSF48173 SSF52425 TIGR02766 mobidb-lite	25
LotjaGi1g1v0145900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cryptochrome 1; TAIR: AT4G08920.1 cryptochrome 1; Swiss-Prot: sp\|Q43125\|CRY1_ARATH Cryptochrome-1; TrEMBL-Plants: tr\|A0A0L9UYT7\|A0A0L9UYT7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0145900	Domains G3DSA:1.10.579.10 G3DSA:1.25.40.80 G3DSA:3.40.50.620 IPR002081 IPR005101 IPR006050 IPR014134 IPR014729 IPR018394 IPR020978 IPR036134 IPR036155 PF00875 PF03441 PF12546 PR00147 PS00394 PS00691 PS51645 PTHR11455 PTHR11455:SF50 SSF48173 SSF52425 TIGR02766 mobidb-lite	25
LotjaGi1g1v0243300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cryptochrome 1; TAIR: AT4G08920.1 cryptochrome 1; Swiss-Prot: sp\|Q43125\|CRY1_ARATH Cryptochrome-1; TrEMBL-Plants: tr\|D0FZ12\|D0FZ12_SOYBN Cryptochrome1; Found in the gene: LotjaGi1g1v0243300	Domains Coil G3DSA:1.10.579.10 G3DSA:1.25.40.80 G3DSA:3.40.50.620 IPR002081 IPR005101 IPR006050 IPR014134 IPR014729 IPR018394 IPR020978 IPR036134 IPR036155 PF00875 PF03441 PF12546 PR00147 PS00394 PS00691 PS51645 PTHR11455 PTHR11455:SF50 SSF48173 SSF52425 TIGR02766 mobidb-lite	26
LotjaGi1g1v0243300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cryptochrome 1; TAIR: AT4G08920.1 cryptochrome 1; Swiss-Prot: sp\|Q43125\|CRY1_ARATH Cryptochrome-1; TrEMBL-Plants: tr\|D0FZ12\|D0FZ12_SOYBN Cryptochrome1; Found in the gene: LotjaGi1g1v0243300	Domains Coil G3DSA:1.10.579.10 G3DSA:1.25.40.80 G3DSA:3.40.50.620 IPR002081 IPR005101 IPR006050 IPR014134 IPR014729 IPR018394 IPR020978 IPR036134 IPR036155 PF00875 PF03441 PF12546 PR00147 PS00394 PS00691 PS51645 PTHR11455 PTHR11455:SF50 SSF48173 SSF52425 TIGR02766 mobidb-lite	26
LotjaGi1g1v0392600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cryptochrome; TAIR: AT5G24850.1 cryptochrome 3; Swiss-Prot: sp\|Q84KJ5\|CRYD_ARATH Cryptochrome DASH, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|G7JCC1\|G7JCC1_MEDTR Cryptochrome, DASH family protein; Found in the gene: LotjaGi1g1v0392600	Domains G3DSA:1.10.579.10 G3DSA:1.25.40.80 G3DSA:3.40.50.620 IPR002081 IPR005101 IPR006050 IPR014133 IPR014729 IPR036134 IPR036155 NON_CYTOPLASMIC_DOMAIN PF00875 PF03441 PR00147 PS51645 PTHR11455 PTHR11455:SF53 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF48173 SSF52425 SignalP-TM SignalP-noTM TIGR02765 mobidb-lite	27
LotjaGi5g1v0191200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cryptochrome-1; TAIR: AT1G04400.1 cryptochrome 2; Swiss-Prot: sp\|Q96524\|CRY2_ARATH Cryptochrome-2; TrEMBL-Plants: tr\|A0A151U5N9\|A0A151U5N9_CAJCA Cryptochrome-2; Found in the gene: LotjaGi5g1v0191200	Domains G3DSA:1.10.579.10 G3DSA:1.25.40.80 G3DSA:3.40.50.620 IPR002081 IPR005101 IPR006050 IPR014134 IPR014729 IPR018394 IPR036134 IPR036155 PF00875 PF03441 PR00147 PS00394 PS00691 PS51645 PTHR11455 PTHR11455:SF54 SSF48173 SSF52425 TIGR02766 mobidb-lite	23
LotjaGi6g1v0005600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cryptochrome-1; TAIR: AT1G04400.1 cryptochrome 2; Swiss-Prot: sp\|Q96524\|CRY2_ARATH Cryptochrome-2; TrEMBL-Plants: tr\|V7BMM9\|V7BMM9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0005600	Domains Coil G3DSA:1.10.579.10 G3DSA:1.25.40.80 G3DSA:3.40.50.620 IPR002081 IPR005101 IPR006050 IPR014134 IPR014729 IPR018394 IPR036134 IPR036155 PF00875 PF03441 PR00147 PS00394 PS51645 PTHR11455 PTHR11455:SF54 SSF48173 SSF52425 TIGR02766 mobidb-lite	23
LotjaGi6g1v0005600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cryptochrome-1; TAIR: AT1G04400.1 cryptochrome 2; Swiss-Prot: sp\|Q96524\|CRY2_ARATH Cryptochrome-2; TrEMBL-Plants: tr\|V7BMM9\|V7BMM9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0005600	Domains Coil G3DSA:1.10.579.10 G3DSA:1.25.40.80 G3DSA:3.40.50.620 IPR002081 IPR005101 IPR006050 IPR014134 IPR014729 IPR018394 IPR036134 IPR036155 PF00875 PF03441 PR00147 PS00394 PS51645 PTHR11455 PTHR11455:SF54 SSF48173 SSF52425 TIGR02766 mobidb-lite	23
LotjaGi6g1v0005600.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cryptochrome-1; TAIR: AT1G04400.1 cryptochrome 2; Swiss-Prot: sp\|Q96524\|CRY2_ARATH Cryptochrome-2; TrEMBL-Plants: tr\|V7BMM9\|V7BMM9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0005600	Domains Coil G3DSA:1.10.579.10 G3DSA:1.25.40.80 G3DSA:3.40.50.620 IPR002081 IPR005101 IPR006050 IPR014134 IPR014729 IPR018394 IPR036134 IPR036155 PF00875 PF03441 PR00147 PS00394 PS51645 PTHR11455 PTHR11455:SF54 SSF48173 SSF52425 TIGR02766 mobidb-lite	23

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	7.14