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TIGR02766

Source: TIGRFAM

Description

crypt_chrom_pln: cryptochrome, plant family

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0009785
Biological process Blue light signaling pathway The series of molecular signals initiated upon sensing of blue light by photoreceptor molecule, at a wavelength between 400nm and 470nm.
Subterm of
GO:0009882
Molecular function Blue light photoreceptor activity The function of absorbing and responding to electromagnetic radiation with a wavelength of approximately 400-470nm. The response may involve a change in conformation.
Subterm of

Associated Lotus transcripts 13

Transcript Name Description Predicted domains Domain count
Lj0g3v0011479.1
– Cryptochrome [Medicago truncatula] gi|357489649|ref|XP_003615112.1|
Domains
19
Lj0g3v0286829.1
– Cryptochrome-1-like [Glycine max] gi|359806517|ref|NP_001241002.1|
Domains
24
Lj5g3v1203330.1
– PREDICTED: cryptochrome-2-like [Glycine max] gi|356576533|ref|XP_003556385.1|
Domains
21
Lj6g3v0029980.1
– PREDICTED: cryptochrome-2-like isoform X1 [Cicer arietinum] gi|502122637|ref|XP_004497843.1|
Domains
21
Lj6g3v0029980.2
– PREDICTED: cryptochrome-2-like isoform X1 [Cicer arietinum] gi|502122637|ref|XP_004497843.1|
Domains
21
LotjaGi1g1v0145900.1
– Cryptochrome 1; TAIR: AT4G08920.1 cryptochrome 1; Swiss-Prot: sp|Q43125|CRY1_ARATH Cryptochrome-1; TrEMBL-Plants: tr|A0A0L9UYT7|A0A0L9UYT7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0145900
Domains
25
LotjaGi1g1v0145900.2
– Cryptochrome 1; TAIR: AT4G08920.1 cryptochrome 1; Swiss-Prot: sp|Q43125|CRY1_ARATH Cryptochrome-1; TrEMBL-Plants: tr|A0A0L9UYT7|A0A0L9UYT7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0145900
Domains
25
LotjaGi1g1v0243300.1
– Cryptochrome 1; TAIR: AT4G08920.1 cryptochrome 1; Swiss-Prot: sp|Q43125|CRY1_ARATH Cryptochrome-1; TrEMBL-Plants: tr|D0FZ12|D0FZ12_SOYBN Cryptochrome1; Found in the gene: LotjaGi1g1v0243300
Domains
26
LotjaGi1g1v0243300.2
– Cryptochrome 1; TAIR: AT4G08920.1 cryptochrome 1; Swiss-Prot: sp|Q43125|CRY1_ARATH Cryptochrome-1; TrEMBL-Plants: tr|D0FZ12|D0FZ12_SOYBN Cryptochrome1; Found in the gene: LotjaGi1g1v0243300
Domains
26
LotjaGi5g1v0191200.1
– Cryptochrome-1; TAIR: AT1G04400.1 cryptochrome 2; Swiss-Prot: sp|Q96524|CRY2_ARATH Cryptochrome-2; TrEMBL-Plants: tr|A0A151U5N9|A0A151U5N9_CAJCA Cryptochrome-2; Found in the gene: LotjaGi5g1v0191200
Domains
23
LotjaGi6g1v0005600.1
– Cryptochrome-1; TAIR: AT1G04400.1 cryptochrome 2; Swiss-Prot: sp|Q96524|CRY2_ARATH Cryptochrome-2; TrEMBL-Plants: tr|V7BMM9|V7BMM9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0005600
Domains
23
LotjaGi6g1v0005600.2
– Cryptochrome-1; TAIR: AT1G04400.1 cryptochrome 2; Swiss-Prot: sp|Q96524|CRY2_ARATH Cryptochrome-2; TrEMBL-Plants: tr|V7BMM9|V7BMM9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0005600
Domains
23
LotjaGi6g1v0005600.3
– Cryptochrome-1; TAIR: AT1G04400.1 cryptochrome 2; Swiss-Prot: sp|Q96524|CRY2_ARATH Cryptochrome-2; TrEMBL-Plants: tr|V7BMM9|V7BMM9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0005600
Domains
23

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 7.69