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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0819090 |
| Transcript ID | Lj6g3v0819090.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: leucyl-tRNA synthetase, cytoplasmic-like [Glycine max] gi|356497127|ref|XP_003517414.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 105 | 104 | 0 | – | |
| PANTHER | 2 | 105 | 104 | 0 | – | |
| Gene3D | 16 | 110 | 95 | 7.20E-98 | ||
| SUPERFAMILY | 17 | 106 | 90 | 1.21E-94 | – | |
| TIGRFAM | 19 | 1050 | 1032 | 1.30E-268 | ||
| Pfam | 24 | 106 | 83 | 5.20E-08 | ||
| ProSitePatterns | 56 | 67 | 12 | – | ||
| MobiDBLite | 118 | 145 | 28 | – | – | |
| Gene3D | 158 | 263 | 106 | 7.20E-98 | ||
| PANTHER | 168 | 316 | 149 | 0 | – | |
| PANTHER | 168 | 316 | 149 | 0 | – | |
| SUPERFAMILY | 178 | 259 | 82 | 1.21E-94 | – | |
| Pfam | 187 | 756 | 570 | 2.80E-29 | ||
| Gene3D | 267 | 531 | 265 | 4.60E-45 | ||
| SUPERFAMILY | 283 | 411 | 129 | 1.22E-28 | ||
| PANTHER | 344 | 446 | 103 | 0 | – | |
| PANTHER | 344 | 446 | 103 | 0 | – | |
| Coils | 451 | 471 | 21 | – | – | |
| SUPERFAMILY | 478 | 517 | 40 | 1.22E-28 | ||
| PANTHER | 488 | 1038 | 551 | 0 | – | |
| PANTHER | 488 | 1038 | 551 | 0 | – | |
| SUPERFAMILY | 517 | 761 | 245 | 1.21E-94 | – | |
| CDD | 530 | 758 | 229 | 3.13E-67 | – | |
| Gene3D | 532 | 746 | 215 | 7.20E-98 | ||
| Gene3D | 747 | 892 | 146 | 2.80E-18 | ||
| CDD | 756 | 876 | 121 | 1.56E-39 | – | |
| SUPERFAMILY | 766 | 892 | 127 | 2.88E-17 | ||
| Pfam | 798 | 915 | 118 | 2.10E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Aminoacyl-tRNA editing activity | The hydrolysis of an incorrectly aminoacylated tRNA. | ||
| Molecular function | Aminoacyl-tRNA ligase activity | Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP. | ||
| Molecular function | Leucine-tRNA ligase activity | Catalysis of the reaction: L-leucine + ATP + tRNA(Leu) = AMP + diphosphate + 2 H(+) + Leu-tRNA(Leu). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | TRNA aminoacylation for protein translation | The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA and the alpha carboxylic acid group of an amino acid, to be used in ribosome-mediated polypeptide synthesis. | ||
| Biological process | Leucyl-tRNA aminoacylation | The process of coupling leucine to leucyl-tRNA, catalyzed by leucyl-tRNA synthetase. The leucyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a leucine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification. |
Expression pattern of Lj6g3v0819090.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0819090.1, powered by CORGI.
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