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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1007870 |
| Transcript ID | Lj6g3v1007870.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | NBS-LRR resistance-like protein 1N [Medicago truncatula] gi|357458159|ref|XP_003599360.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 513 | 513 | 0 | – | |
| Phobius | 1 | 1 | 1 | – | – | |
| Phobius | 1 | 19 | 19 | – | – | |
| PANTHER | 1 | 513 | 513 | 0 | – | |
| Phobius | 2 | 13 | 12 | – | – | |
| Phobius | 14 | 19 | 6 | – | – | |
| Phobius | 20 | 841 | 822 | – | – | |
| Coils | 41 | 61 | 21 | – | – | |
| Coils | 68 | 95 | 28 | – | – | |
| SUPERFAMILY | 161 | 394 | 234 | 8.47E-59 | ||
| Gene3D | 168 | 317 | 150 | 6.60E-14 | ||
| Pfam | 189 | 374 | 186 | 2.90E-44 | ||
| PRINTS | 193 | 208 | 16 | 1.70E-18 | – | |
| PRINTS | 266 | 280 | 15 | 1.70E-18 | – | |
| PRINTS | 363 | 377 | 15 | 1.70E-18 | – | |
| SUPERFAMILY | 456 | 669 | 214 | 3.74E-40 | ||
| Gene3D | 528 | 661 | 134 | 1.90E-28 | ||
| PANTHER | 532 | 788 | 257 | 0 | – | |
| PANTHER | 532 | 788 | 257 | 0 | – | |
| Pfam | 541 | 598 | 58 | 1.40E-06 | ||
| SMART | 562 | 585 | 24 | 3.1 | ||
| PRINTS | 583 | 599 | 17 | 1.70E-18 | – | |
| SMART | 609 | 632 | 24 | 3.4 | ||
| SUPERFAMILY | 704 | 810 | 107 | 3.74E-40 | ||
| Gene3D | 720 | 808 | 89 | 1.90E-28 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of Lj6g3v1007870.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1007870.1, powered by CORGI.
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