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Lj6g3v1641150.2

Overview

Field Value
Gene ID Lj6g3v1641150
Transcript ID Lj6g3v1641150.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: obg-like ATPase 1-like [Glycine max] gi|356555899|ref|XP_003546267.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23305:SF11
1 315 315 2.50E-181 –
PANTHER
PTHR23305
1 315 315 2.50E-181 –
PIRSF
PIRSF006641
22 321 300 1.70E-110
IPR004396
Gene3D
G3DSA:3.40.50.300
25 152 128 7.50E-42
IPR027417
SUPERFAMILY
SSF52540
25 316 292 2.66E-74
IPR027417
ProSiteProfiles
PS51710
25 282 258 50.775
IPR031167
TIGRFAM
TIGR00092
25 317 293 7.90E-105
IPR004396
Pfam
PF01926
26 151 126 1.70E-22
IPR006073
CDD
cd01900
27 301 275 1.44E-149 –
PRINTS
PR00326
27 47 21 9.60E-29
IPR006073
PRINTS
PR00326
48 66 19 9.60E-29
IPR006073
PRINTS
PR00326
92 107 16 9.60E-29
IPR006073
PRINTS
PR00326
109 127 19 9.60E-29
IPR006073
Gene3D
G3DSA:1.10.150.300
153 223 71 3.00E-27
IPR023192
Coils
Coil
159 179 21 – –
Gene3D
G3DSA:3.40.50.300
224 289 66 7.50E-42
IPR027417
Gene3D
G3DSA:3.10.20.30
290 320 31 1.60E-04
IPR012675

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005525
Molecular function GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
Subterm of

Genome browser

LORE1 insertions 17

Expression data

Expression pattern

Expression pattern of Lj6g3v1641150.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v1641150.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.