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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1966480 |
| Transcript ID | Lj6g3v1966480.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: subtilisin-like protease-like [Glycine max] gi|356546528|ref|XP_003541678.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 24 | 24 | – | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 6 | 19 | 14 | – | – | |
| PANTHER | 13 | 791 | 779 | 0 | – | |
| PANTHER | 13 | 791 | 779 | 0 | ||
| Phobius | 20 | 24 | 5 | – | – | |
| Phobius | 25 | 791 | 767 | – | – | |
| Pfam | 30 | 110 | 81 | 2.90E-14 | ||
| CDD | 112 | 610 | 499 | 2.85E-126 | – | |
| Gene3D | 147 | 379 | 233 | 9.50E-71 | ||
| SUPERFAMILY | 148 | 187 | 40 | 1.20E-69 | ||
| PRINTS | 151 | 170 | 20 | 2.10E-13 | ||
| Pfam | 151 | 614 | 464 | 2.40E-42 | ||
| SUPERFAMILY | 226 | 373 | 148 | 1.20E-69 | ||
| PRINTS | 229 | 242 | 14 | 2.10E-13 | ||
| CDD | 377 | 506 | 130 | 1.50E-30 | – | |
| Pfam | 419 | 492 | 74 | 4.80E-11 | ||
| Gene3D | 422 | 497 | 76 | 3.10E-05 | – | |
| SUPERFAMILY | 428 | 498 | 71 | 5.36E-05 | – | |
| Gene3D | 517 | 645 | 129 | 9.50E-71 | ||
| SUPERFAMILY | 522 | 649 | 128 | 1.20E-69 | ||
| PRINTS | 575 | 591 | 17 | 2.10E-13 | ||
| ProSitePatterns | 576 | 586 | 11 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj6g3v1966480.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1966480.1, powered by CORGI.
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